Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CENPUP2-201ENST00000555897 1186 ntBASIC3.72□□□□□ -1.81
CDH4P55283 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.72□□□□□ -1.81
CDH4P55283 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH4P55283 KLKP1-201ENST00000595979 403 ntBASIC3.72□□□□□ -1.81
CDH4P55283 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH4P55283 AL359535.1-201ENST00000612100 1087 ntBASIC3.72□□□□□ -1.81
CDH4P55283 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.72□□□□□ -1.81
CDH4P55283 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH4P55283 MIR4496-201ENST00000635896 61 ntBASIC3.72□□□□□ -1.81
CDH4P55283 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH4P55283 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH4P55283 AC009093.8-201ENST00000641769 292 ntBASIC3.72□□□□□ -1.81
CDH4P55283 AL732372.2-225ENST00000642124 456 ntBASIC3.72□□□□□ -1.81
CDH4P55283 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH4P55283 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CDH4P55283 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH4P55283 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH4P55283 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH4P55283 AC007823.1-201ENST00000569932 1566 ntBASIC3.72□□□□□ -1.81
CDH4P55283 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDH4P55283 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH4P55283 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH4P55283 AC104446.1-201ENST00000613728 1321 ntBASIC3.71□□□□□ -1.81
CDH4P55283 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH4P55283 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH4P55283 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CDH4P55283 RNA5SP167-201ENST00000365461 116 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC009237.5-201ENST00000414271 501 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 PSMA2P3-201ENST00000429685 675 ntBASIC3.71□□□□□ -1.82
CDH4P55283 ARL4AP4-201ENST00000434170 518 ntBASIC3.71□□□□□ -1.82
CDH4P55283 CKS1BP5-201ENST00000434172 273 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 AC068135.1-201ENST00000446164 246 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH4P55283 BX276092.4-201ENST00000452056 248 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 RN7SL93P-201ENST00000463035 293 ntBASIC3.71□□□□□ -1.82
CDH4P55283 RPL23AP62-201ENST00000463396 453 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC010307.1-201ENST00000467206 836 ntBASIC3.71□□□□□ -1.82
CDH4P55283 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH4P55283 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
CDH4P55283 RN7SKP96-201ENST00000516948 297 ntBASIC3.71□□□□□ -1.82
CDH4P55283 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH4P55283 OR8L1P-201ENST00000534005 955 ntBASIC3.71□□□□□ -1.82
CDH4P55283 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH4P55283 AC074029.1-201ENST00000552531 1044 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC090312.2-201ENST00000582687 378 ntBASIC3.71□□□□□ -1.82
CDH4P55283 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH4P55283 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH4P55283 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH4P55283 AC079791.1-201ENST00000605356 973 ntBASIC3.71□□□□□ -1.82
CDH4P55283 RNA5SP108-201ENST00000605921 117 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH4P55283 AC112503.1-201ENST00000608436 391 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AL391261.4-201ENST00000616012 481 ntBASIC3.71□□□□□ -1.82
CDH4P55283 AC138649.5-201ENST00000637456 137 ntBASIC3.71□□□□□ -1.82
CDH4P55283 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CDH4P55283 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH4P55283 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH4P55283 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH4P55283 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH4P55283 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH4P55283 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CDH4P55283 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH4P55283 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH4P55283 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH4P55283 MIR449B-201ENST00000384995 97 ntBASIC3.7□□□□□ -1.82
CDH4P55283 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH4P55283 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH4P55283 OR51AB1P-201ENST00000429046 620 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH4P55283 CYCSP4-201ENST00000429682 331 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC091286.1-201ENST00000431233 461 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC005189.1-201ENST00000431286 310 ntBASIC3.7□□□□□ -1.82
CDH4P55283 HSPD1P21-201ENST00000436541 245 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH4P55283 RPS15AP29-201ENST00000445539 400 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH4P55283 AC073387.1-201ENST00000453261 709 ntBASIC3.7□□□□□ -1.82
CDH4P55283 MTCO3P20-201ENST00000454926 688 ntBASIC3.7□□□□□ -1.82
CDH4P55283 TPRKBP1-201ENST00000456243 481 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AL136097.1-201ENST00000456945 913 ntBASIC3.7□□□□□ -1.82
CDH4P55283 RPL7L1P8-201ENST00000469911 741 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC126121.1-201ENST00000482313 553 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH4P55283 HMGB3P14-201ENST00000494195 599 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC008565.1-201ENST00000509046 885 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC093755.1-201ENST00000512950 1023 ntBASIC3.7□□□□□ -1.82
CDH4P55283 HMGN1P15-201ENST00000513870 295 ntBASIC3.7□□□□□ -1.82
CDH4P55283 RNU6-579P-201ENST00000516879 102 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH4P55283 IGKV2D-19-201ENST00000523346 262 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms