Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 PRELID3BP10-201ENST00000431957 584 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 XKRYP2-201ENST00000432915 492 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 HMGB3P9-201ENST00000441799 583 ntBASIC4.02□□□□□ -1.77
PDX1P52945 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 AC091951.3-201ENST00000504093 246 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC118282.1-201ENST00000506408 765 ntBASIC4.02□□□□□ -1.77
PDX1P52945 PPBPP1-201ENST00000510807 373 ntBASIC4.02□□□□□ -1.77
PDX1P52945 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 AC006064.5-201ENST00000541782 248 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 HNRNPCP4-201ENST00000571636 900 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC022655.2-201ENST00000577280 318 ntBASIC4.02□□□□□ -1.77
PDX1P52945 MIR4716-201ENST00000579628 84 ntBASIC4.02□□□□□ -1.77
PDX1P52945 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.02□□□□□ -1.77
PDX1P52945 AP001269.3-201ENST00000588718 329 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC022022.2-201ENST00000602989 360 ntBASIC4.02□□□□□ -1.77
PDX1P52945 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.02□□□□□ -1.77
PDX1P52945 AC107952.2-201ENST00000606048 486 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 AC024257.5-201ENST00000612739 531 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 AF001550.2-201ENST00000636643 217 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC090897.3-201ENST00000636973 1157 ntBASIC4.02□□□□□ -1.77
PDX1P52945 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 Z82217.1-201ENST00000625157 8149 ntBASIC4.02□□□□□ -1.77
PDX1P52945 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 AL451142.2-201ENST00000429076 2090 ntBASIC4.02□□□□□ -1.77
PDX1P52945 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 MTND4P26-201ENST00000415971 1359 ntBASIC4.02□□□□□ -1.77
PDX1P52945 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDX1P52945 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 HMGB1P5-201ENST00000255320 642 ntBASIC4.01□□□□□ -1.77
PDX1P52945 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 RNU1-108P-201ENST00000362556 161 ntBASIC4.01□□□□□ -1.77
PDX1P52945 RNU6-582P-201ENST00000362989 107 ntBASIC4.01□□□□□ -1.77
PDX1P52945 RNU4-92P-201ENST00000363783 136 ntBASIC4.01□□□□□ -1.77
PDX1P52945 SNORA70.4-201ENST00000365509 134 ntBASIC4.01□□□□□ -1.77
PDX1P52945 MIR23A-201ENST00000385245 73 ntBASIC4.01□□□□□ -1.77
PDX1P52945 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 AC004022.2-201ENST00000413824 193 ntBASIC4.01□□□□□ -1.77
PDX1P52945 RPS23P10-201ENST00000416185 486 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 ELOCP9-201ENST00000418624 239 ntBASIC4.01□□□□□ -1.77
PDX1P52945 EIF1P3-201ENST00000423841 334 ntBASIC4.01□□□□□ -1.77
PDX1P52945 IPMKP1-201ENST00000425988 855 ntBASIC4.01□□□□□ -1.77
PDX1P52945 Z93242.1-201ENST00000427102 353 ntBASIC4.01□□□□□ -1.77
PDX1P52945 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC006946.1-201ENST00000429106 328 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 AC010881.1-201ENST00000433830 235 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC007389.2-201ENST00000434630 306 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.01□□□□□ -1.77
PDX1P52945 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 PTENP1-201ENST00000447117 1215 ntBASIC4.01□□□□□ -1.77
PDX1P52945 Z73417.1-201ENST00000447373 778 ntBASIC4.01□□□□□ -1.77
PDX1P52945 VN1R34P-201ENST00000447387 883 ntBASIC4.01□□□□□ -1.77
PDX1P52945 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.01□□□□□ -1.77
PDX1P52945 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.01□□□□□ -1.77
PDX1P52945 USP9YP25-201ENST00000457708 443 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 AC010683.1-201ENST00000473673 378 ntBASIC4.01□□□□□ -1.77
PDX1P52945 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC104164.2-201ENST00000496953 495 ntBASIC4.01□□□□□ -1.77
PDX1P52945 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 AC114322.1-201ENST00000506771 926 ntBASIC4.01□□□□□ -1.77
PDX1P52945 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 RPL7L1P13-201ENST00000511702 739 ntBASIC4.01□□□□□ -1.77
PDX1P52945 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 RNA5SP135-201ENST00000517019 125 ntBASIC4.01□□□□□ -1.77
PDX1P52945 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.01□□□□□ -1.77
PDX1P52945 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.01□□□□□ -1.77
PDX1P52945 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.01□□□□□ -1.77
PDX1P52945 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.01□□□□□ -1.77
PDX1P52945 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 LRRC34P1-201ENST00000542742 915 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.01□□□□□ -1.77
PDX1P52945 MTND4P33-201ENST00000556706 766 ntBASIC4.01□□□□□ -1.77
PDX1P52945 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.01□□□□□ -1.77
PDX1P52945 GAS5-AS1-201ENST00000602767 694 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC113368.1-201ENST00000603736 382 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms