Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GTF2A1P52655 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GTF2A1P52655 RPL23AP57-201ENST00000332361 466 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 SNORA51.2-201ENST00000364595 132 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.2□□□□□ -1.9
GTF2A1P52655 MIR153-1-201ENST00000384914 90 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 RAD23BP2-201ENST00000416003 1207 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
GTF2A1P52655 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GTF2A1P52655 AL390879.2-203ENST00000426943 1121 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GTF2A1P52655 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.2□□□□□ -1.9
GTF2A1P52655 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.2□□□□□ -1.9
GTF2A1P52655 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.2□□□□□ -1.9
GTF2A1P52655 AP000705.1-201ENST00000454567 350 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 AC026979.1-201ENST00000492525 396 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 RPL21P131-201ENST00000497298 483 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GTF2A1P52655 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.2□□□□□ -1.9
GTF2A1P52655 AC025884.1-201ENST00000556034 378 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.2□□□□□ -1.9
GTF2A1P52655 AC083760.1-201ENST00000589621 670 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GTF2A1P52655 AC112484.5-201ENST00000624189 228 ntBASIC3.2□□□□□ -1.9
GTF2A1P52655 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1P52655 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1P52655 RNU6-213P-201ENST00000384051 104 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 MIR323B-201ENST00000385269 82 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 ZNF602P-201ENST00000405929 924 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 CRYBB2P1-203ENST00000415709 538 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 EI24P1-201ENST00000416584 867 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 MRPL50P2-201ENST00000416821 482 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 COX6CP17-201ENST00000421389 185 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 SDCBPP2-201ENST00000424643 885 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1P52655 RPL21P112-201ENST00000434403 463 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 SETD6P1-201ENST00000444575 317 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AC008264.1-201ENST00000447612 367 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AC097262.1-201ENST00000452559 548 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.19□□□□□ -1.9
GTF2A1P52655 VN1R105P-201ENST00000486595 910 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 SNORA31.15-201ENST00000516771 132 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AP001207.1-201ENST00000524051 481 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.19□□□□□ -1.9
GTF2A1P52655 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1P52655 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1P52655 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1P52655 AC034236.3-201ENST00000605999 461 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AL390240.1-201ENST00000612950 384 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AC083809.1-201ENST00000615051 472 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.19□□□□□ -1.9
GTF2A1P52655 AC145207.9-201ENST00000623802 325 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AP003072.4-201ENST00000624580 310 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1P52655 AL355480.1-201ENST00000629041 99 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1P52655 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 AP000553.6-201ENST00000641242 118 ntBASIC3.19□□□□□ -1.9
GTF2A1P52655 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1P52655 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
GTF2A1P52655 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1P52655 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 SNORA7.2-201ENST00000364446 145 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
GTF2A1P52655 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.18□□□□□ -1.9
GTF2A1P52655 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.18□□□□□ -1.9
GTF2A1P52655 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.18□□□□□ -1.9
GTF2A1P52655 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.18□□□□□ -1.9
GTF2A1P52655 RN7SL323P-201ENST00000494712 295 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.18□□□□□ -1.9
GTF2A1P52655 AC138761.3-201ENST00000579993 334 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 MIR3670-2-201ENST00000582974 65 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 MIR3670-1-201ENST00000584160 65 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 MIR3670-3-201ENST00000584855 65 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 AC113368.1-201ENST00000603736 382 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.18□□□□□ -1.9
GTF2A1P52655 MIR3670-4-201ENST00000612260 65 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 AC022079.2-201ENST00000619739 566 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 FP236240.3-201ENST00000623061 327 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 AP000676.4-201ENST00000624659 623 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 AC119674.1-207ENST00000641355 633 ntBASIC3.18□□□□□ -1.9
GTF2A1P52655 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GTF2A1P52655 Z83843.1-201ENST00000604070 3685 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GTF2A1P52655 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.17□□□□□ -1.9
GTF2A1P52655 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AL121657.1-201ENST00000327215 531 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GTF2A1P52655 RPL7P60-201ENST00000397636 735 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms