Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL139395.1-201ENST00000603662 160 ntBASIC3.23□□□□□ -1.89
HTTP42858 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.23□□□□□ -1.89
HTTP42858 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.22□□□□□ -1.89
HTTP42858 AL022311.1-201ENST00000623726 19416 ntBASIC3.22□□□□□ -1.89
HTTP42858 RPS4XP5-202ENST00000449995 1334 ntBASIC3.22□□□□□ -1.89
HTTP42858 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
HTTP42858 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.22□□□□□ -1.89
HTTP42858 AC010307.1-201ENST00000467206 836 ntBASIC3.22□□□□□ -1.89
HTTP42858 AC078785.3-201ENST00000476607 425 ntBASIC3.22□□□□□ -1.89
HTTP42858 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.22□□□□□ -1.89
HTTP42858 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HTTP42858 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HTTP42858 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HTTP42858 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HTTP42858 AL450338.1-201ENST00000407987 512 ntBASIC3.22□□□□□ -1.89
HTTP42858 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.22□□□□□ -1.89
HTTP42858 AC012123.2-201ENST00000485809 248 ntBASIC3.22□□□□□ -1.89
HTTP42858 IGHV3-63-201ENST00000518422 341 ntBASIC3.22□□□□□ -1.89
HTTP42858 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.22□□□□□ -1.89
HTTP42858 AL034351.1-201ENST00000605288 668 ntBASIC3.22□□□□□ -1.89
HTTP42858 AL365400.2-201ENST00000605604 902 ntBASIC3.22□□□□□ -1.89
HTTP42858 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HTTP42858 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HTTP42858 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
HTTP42858 RN7SKP192-201ENST00000411291 327 ntBASIC3.22□□□□□ -1.89
HTTP42858 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.22□□□□□ -1.89
HTTP42858 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HTTP42858 NEAT1-202ENST00000501122 22743 ntBASIC3.21□□□□□ -1.9
HTTP42858 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HTTP42858 AL022322.2-201ENST00000624072 20397 ntBASIC3.21□□□□□ -1.9
HTTP42858 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HTTP42858 RN7SKP199-201ENST00000410325 305 ntBASIC3.21□□□□□ -1.9
HTTP42858 RNA5SP445-201ENST00000515889 115 ntBASIC3.21□□□□□ -1.9
HTTP42858 AC007954.1-201ENST00000554198 494 ntBASIC3.21□□□□□ -1.9
HTTP42858 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.21□□□□□ -1.9
HTTP42858 AP006437.1-201ENST00000641440 3685 ntBASIC3.21□□□□□ -1.9
HTTP42858 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HTTP42858 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.21□□□□□ -1.9
HTTP42858 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HTTP42858 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HTTP42858 AC104297.1-201ENST00000393779 870 ntBASIC3.21□□□□□ -1.9
HTTP42858 AL009174.1-201ENST00000426577 416 ntBASIC3.21□□□□□ -1.9
HTTP42858 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
HTTP42858 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.21□□□□□ -1.9
HTTP42858 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.21□□□□□ -1.9
HTTP42858 AP001646.1-201ENST00000527936 915 ntBASIC3.21□□□□□ -1.9
HTTP42858 GMCL1P2-201ENST00000605230 823 ntBASIC3.21□□□□□ -1.9
HTTP42858 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
HTTP42858 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
HTTP42858 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HTTP42858 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HTTP42858 AL356057.3-201ENST00000402607 340 ntBASIC3.2□□□□□ -1.9
HTTP42858 RPL7P25-201ENST00000404151 721 ntBASIC3.2□□□□□ -1.9
HTTP42858 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.2□□□□□ -1.9
HTTP42858 AC090525.1-201ENST00000479116 478 ntBASIC3.2□□□□□ -1.9
HTTP42858 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.2□□□□□ -1.9
HTTP42858 RNU6-513P-201ENST00000516104 104 ntBASIC3.2□□□□□ -1.9
HTTP42858 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.2□□□□□ -1.9
HTTP42858 MIR4648-201ENST00000580107 72 ntBASIC3.2□□□□□ -1.9
HTTP42858 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.2□□□□□ -1.9
HTTP42858 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HTTP42858 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HTTP42858 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.2□□□□□ -1.9
HTTP42858 Z99127.3-201ENST00000448158 395 ntBASIC3.2□□□□□ -1.9
HTTP42858 OR5G4P-201ENST00000525251 760 ntBASIC3.2□□□□□ -1.9
HTTP42858 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.2□□□□□ -1.9
HTTP42858 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.2□□□□□ -1.9
HTTP42858 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.2□□□□□ -1.9
HTTP42858 AC233309.1-201ENST00000619522 751 ntBASIC3.2□□□□□ -1.9
HTTP42858 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HTTP42858 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.2□□□□□ -1.9
HTTP42858 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HTTP42858 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.2□□□□□ -1.9
HTTP42858 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HTTP42858 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HTTP42858 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HTTP42858 AP002088.1-201ENST00000382740 395 ntBASIC3.19□□□□□ -1.9
HTTP42858 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
HTTP42858 MTND2P25-201ENST00000449028 610 ntBASIC3.19□□□□□ -1.9
HTTP42858 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
HTTP42858 RNA5SP148-201ENST00000516527 94 ntBASIC3.19□□□□□ -1.9
HTTP42858 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.19□□□□□ -1.9
HTTP42858 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.19□□□□□ -1.9
HTTP42858 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HTTP42858 MAPK10-322ENST00000641485 4530 ntBASIC3.19□□□□□ -1.9
HTTP42858 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HTTP42858 AC134882.1-201ENST00000603738 1676 ntBASIC3.19□□□□□ -1.9
HTTP42858 Y_RNA.40-201ENST00000362645 93 ntBASIC3.19□□□□□ -1.9
HTTP42858 FAM103A2P-201ENST00000444122 354 ntBASIC3.19□□□□□ -1.9
HTTP42858 AP001636.2-201ENST00000525517 696 ntBASIC3.19□□□□□ -1.9
HTTP42858 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.19□□□□□ -1.9
HTTP42858 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.19□□□□□ -1.9
HTTP42858 AC092184.1-201ENST00000625042 715 ntBASIC3.19□□□□□ -1.9
HTTP42858 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HTTP42858 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.19□□□□□ -1.9
HTTP42858 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HTTP42858 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HTTP42858 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HTTP42858 RNU6-482P-201ENST00000391068 107 ntBASIC3.19□□□□□ -1.9
HTTP42858 SEPT7P6-201ENST00000469999 1143 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms