Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KATNBL1P5-201ENST00000605015 517 ntBASIC2.87□□□□□ -1.95
CD28P10747 AP003117.2-201ENST00000606010 545 ntBASIC2.87□□□□□ -1.95
CD28P10747 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.87□□□□□ -1.95
CD28P10747 AC091953.5-201ENST00000622919 233 ntBASIC2.87□□□□□ -1.95
CD28P10747 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.87□□□□□ -1.95
CD28P10747 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.87□□□□□ -1.95
CD28P10747 AC090337.1-201ENST00000579651 2074 ntBASIC2.87□□□□□ -1.95
CD28P10747 UBE3AP2-201ENST00000429033 2259 ntBASIC2.87□□□□□ -1.95
CD28P10747 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.87□□□□□ -1.95
CD28P10747 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CD28P10747 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CD28P10747 DCAF13P3-201ENST00000561147 1334 ntBASIC2.87□□□□□ -1.95
CD28P10747 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CD28P10747 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.87□□□□□ -1.95
CD28P10747 AC007823.1-201ENST00000569932 1566 ntBASIC2.87□□□□□ -1.95
CD28P10747 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.87□□□□□ -1.95
CD28P10747 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD28P10747 AC006504.1-201ENST00000562493 3666 ntBASIC2.86□□□□□ -1.95
CD28P10747 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.86□□□□□ -1.95
CD28P10747 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD28P10747 SNORD9-201ENST00000362566 104 ntBASIC2.86□□□□□ -1.95
CD28P10747 RNA5SP50-201ENST00000363731 107 ntBASIC2.86□□□□□ -1.95
CD28P10747 MIR142-201ENST00000384835 87 ntBASIC2.86□□□□□ -1.95
CD28P10747 RNU2-21P-201ENST00000410368 188 ntBASIC2.86□□□□□ -1.95
CD28P10747 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AL158825.1-201ENST00000414735 521 ntBASIC2.86□□□□□ -1.95
CD28P10747 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.86□□□□□ -1.95
CD28P10747 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.86□□□□□ -1.95
CD28P10747 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AL691517.1-201ENST00000440833 1235 ntBASIC2.86□□□□□ -1.95
CD28P10747 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 SNORD105B-201ENST00000458770 79 ntBASIC2.86□□□□□ -1.95
CD28P10747 AC126121.1-201ENST00000482313 553 ntBASIC2.86□□□□□ -1.95
CD28P10747 SNORA70.24-201ENST00000517233 118 ntBASIC2.86□□□□□ -1.95
CD28P10747 IGKV2D-23-201ENST00000518179 286 ntBASIC2.86□□□□□ -1.95
CD28P10747 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.86□□□□□ -1.95
CD28P10747 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.86□□□□□ -1.95
CD28P10747 AC091515.1-201ENST00000548110 679 ntBASIC2.86□□□□□ -1.95
CD28P10747 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.86□□□□□ -1.95
CD28P10747 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.86□□□□□ -1.95
CD28P10747 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.86□□□□□ -1.95
CD28P10747 AC005412.1-201ENST00000580812 1049 ntBASIC2.86□□□□□ -1.95
CD28P10747 OR4H6P-202ENST00000603819 340 ntBASIC2.86□□□□□ -1.95
CD28P10747 AL450270.1-201ENST00000606160 391 ntBASIC2.86□□□□□ -1.95
CD28P10747 AC105429.2-201ENST00000610567 517 ntBASIC2.86□□□□□ -1.95
CD28P10747 AL354696.1-201ENST00000614652 497 ntBASIC2.86□□□□□ -1.95
CD28P10747 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.86□□□□□ -1.95
CD28P10747 MIR6864-201ENST00000617935 70 ntBASIC2.86□□□□□ -1.95
CD28P10747 MIR7975-201ENST00000619350 68 ntBASIC2.86□□□□□ -1.95
CD28P10747 AC244258.1-201ENST00000637553 1071 ntBASIC2.86□□□□□ -1.95
CD28P10747 FAM35DP-201ENST00000323387 2712 ntBASIC2.86□□□□□ -1.95
CD28P10747 ZNF33CP-201ENST00000432492 2030 ntBASIC2.86□□□□□ -1.95
CD28P10747 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD28P10747 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CD28P10747 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CD28P10747 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CD28P10747 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CD28P10747 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CD28P10747 PRO1804-201ENST00000623780 2050 ntBASIC2.85□□□□□ -1.95
CD28P10747 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CD28P10747 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CD28P10747 RNU6-525P-201ENST00000363685 104 ntBASIC2.85□□□□□ -1.95
CD28P10747 U3.15-201ENST00000365398 212 ntBASIC2.85□□□□□ -1.95
CD28P10747 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CD28P10747 MIR491-201ENST00000384877 84 ntBASIC2.85□□□□□ -1.95
CD28P10747 AL356057.1-202ENST00000402263 756 ntBASIC2.85□□□□□ -1.95
CD28P10747 KRR1P1-201ENST00000419430 803 ntBASIC2.85□□□□□ -1.95
CD28P10747 RPS12P23-201ENST00000419579 400 ntBASIC2.85□□□□□ -1.95
CD28P10747 BX842559.1-201ENST00000419615 532 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC245054.1-201ENST00000420944 258 ntBASIC2.85□□□□□ -1.95
CD28P10747 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.85□□□□□ -1.95
CD28P10747 ATP5HP2-201ENST00000433885 485 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC105402.2-201ENST00000438503 358 ntBASIC2.85□□□□□ -1.95
CD28P10747 PPIAP17-201ENST00000438507 471 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC092809.1-201ENST00000441469 474 ntBASIC2.85□□□□□ -1.95
CD28P10747 RPS7P5-201ENST00000441482 581 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC068135.1-201ENST00000446164 246 ntBASIC2.85□□□□□ -1.95
CD28P10747 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 AC006480.1-201ENST00000449887 378 ntBASIC2.85□□□□□ -1.95
CD28P10747 DNAJC19P1-201ENST00000455312 319 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC010307.1-201ENST00000467206 836 ntBASIC2.85□□□□□ -1.95
CD28P10747 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.85□□□□□ -1.95
CD28P10747 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CD28P10747 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 WBP1LP4-201ENST00000505043 344 ntBASIC2.85□□□□□ -1.95
CD28P10747 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.85□□□□□ -1.95
CD28P10747 AC110792.2-201ENST00000510278 224 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.85□□□□□ -1.95
CD28P10747 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 RNA5SP309-201ENST00000516670 106 ntBASIC2.85□□□□□ -1.95
CD28P10747 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.85□□□□□ -1.95
CD28P10747 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms