Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 Z93242.1-201ENST00000427102 353 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.9□□□□□ -1.79
LMX1BO60663 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.9□□□□□ -1.79
LMX1BO60663 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 MTCYBP39-201ENST00000437562 491 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 RPL23AP93-201ENST00000440847 484 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.9□□□□□ -1.79
LMX1BO60663 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 MTCO2P25-201ENST00000447065 681 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC091153.1-201ENST00000466297 402 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 AC068724.1-201ENST00000487100 792 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 SLC25A15P5-201ENST00000508033 253 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC026402.1-201ENST00000513642 170 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 HMGB1P23-201ENST00000518743 568 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC060788.1-201ENST00000521318 469 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.9□□□□□ -1.79
LMX1BO60663 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC007224.1-201ENST00000564410 144 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC084783.1-201ENST00000565846 910 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC012414.6-201ENST00000568241 401 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 ROCK1P1-201ENST00000573767 549 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 MIR3160-1-201ENST00000577972 85 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.9□□□□□ -1.79
LMX1BO60663 ZNF415P1-201ENST00000582279 1166 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC006539.2-201ENST00000601729 572 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC107304.1-201ENST00000604229 296 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC090525.3-201ENST00000605601 189 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 AC006270.3-201ENST00000605967 1036 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.9□□□□□ -1.79
LMX1BO60663 AL135786.2-201ENST00000608422 615 ntBASIC3.9□□□□□ -1.79
LMX1BO60663 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.9□□□□□ -1.79
LMX1BO60663 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LMX1BO60663 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.9□□□□□ -1.79
LMX1BO60663 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMX1BO60663 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 SNORA62.2-201ENST00000364672 152 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 SNORA68.2-201ENST00000391263 128 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 Z98745.1-201ENST00000402553 494 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 PIGPP2-201ENST00000411569 458 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 USP9YP10-201ENST00000454868 628 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 BX248409.1-201ENST00000455497 255 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC021205.1-201ENST00000468797 348 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 RPL23AP65-201ENST00000475608 468 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 TRBV8-2-201ENST00000475637 270 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 STMN1P2-201ENST00000508435 439 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 USP9YP5-201ENST00000511770 630 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 HMGB1P19-201ENST00000517578 577 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AP001781.1-201ENST00000530977 207 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AP001317.1-201ENST00000531194 960 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC006362.1-201ENST00000567392 174 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC010546.1-201ENST00000569391 485 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC008759.1-201ENST00000589783 983 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AL133338.2-201ENST00000604292 736 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC020634.1-201ENST00000608701 549 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.89□□□□□ -1.79
LMX1BO60663 AL138721.1-201ENST00000616756 179 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms