Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 RPL31P1-201ENST00000398116 372 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 VN1R31P-201ENST00000417498 730 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.5□□□□□ -2.01
SSSCA1O60232 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AL353705.1-201ENST00000433468 480 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.5□□□□□ -2.01
SSSCA1O60232 RPL26P28-201ENST00000451325 435 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 RBMY2UP-201ENST00000453474 324 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 RPL21P41-201ENST00000459863 264 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.5□□□□□ -2.01
SSSCA1O60232 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.5□□□□□ -2.01
SSSCA1O60232 RPS26P21-201ENST00000475397 348 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 RN7SL20P-201ENST00000488827 297 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.5□□□□□ -2.01
SSSCA1O60232 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.5□□□□□ -2.01
SSSCA1O60232 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.5□□□□□ -2.01
SSSCA1O60232 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 MIR2682-201ENST00000580305 110 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 MAGOH2P-202ENST00000584384 429 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 AL590392.1-201ENST00000604960 446 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 AL451074.6-201ENST00000608512 729 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.5□□□□□ -2.01
SSSCA1O60232 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSSCA1O60232 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSSCA1O60232 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.49□□□□□ -2.01
SSSCA1O60232 HSFY4P-201ENST00000415994 1181 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.49□□□□□ -2.01
SSSCA1O60232 AL356806.1-201ENST00000422524 916 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AL662791.1-201ENST00000441992 928 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC012181.1-201ENST00000479895 423 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC021678.1-201ENST00000505195 936 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 TMEM248P1-201ENST00000510579 951 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC005921.1-201ENST00000510589 286 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC023141.12-201ENST00000512399 199 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 RN7SKP21-201ENST00000516503 220 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.49□□□□□ -2.01
SSSCA1O60232 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.49□□□□□ -2.01
SSSCA1O60232 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.49□□□□□ -2.01
SSSCA1O60232 AL163153.1-201ENST00000554223 283 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.49□□□□□ -2.01
SSSCA1O60232 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.49□□□□□ -2.01
SSSCA1O60232 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.49□□□□□ -2.01
SSSCA1O60232 MTCO3P24-201ENST00000572729 782 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.49□□□□□ -2.01
SSSCA1O60232 ZNF415P1-201ENST00000582279 1166 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.49□□□□□ -2.01
SSSCA1O60232 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 GMCL1P2-201ENST00000605230 823 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 AL451086.1-201ENST00000605596 223 ntBASIC2.49□□□□□ -2.01
SSSCA1O60232 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.49□□□□□ -2.01
SSSCA1O60232 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SSSCA1O60232 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
SSSCA1O60232 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSSCA1O60232 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSSCA1O60232 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSSCA1O60232 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AL355578.1-201ENST00000607405 1328 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSSCA1O60232 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.48□□□□□ -2.01
SSSCA1O60232 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.48□□□□□ -2.01
SSSCA1O60232 Z83843.1-201ENST00000604070 3685 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SSSCA1O60232 MIR887-201ENST00000401258 79 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.48□□□□□ -2.01
SSSCA1O60232 RPL21P110-201ENST00000433345 446 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AL590103.1-201ENST00000434488 307 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 HIGD1AP11-201ENST00000438361 280 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AC122718.1-201ENST00000439448 744 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AC092641.1-201ENST00000440229 772 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.48□□□□□ -2.01
SSSCA1O60232 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.48□□□□□ -2.01
SSSCA1O60232 RPL21P13-201ENST00000488305 481 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSSCA1O60232 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AP000619.3-201ENST00000535634 1127 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AC034268.2-201ENST00000571784 482 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms