Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 AC136624.4-201ENST00000573044 370 ntBASIC3.99□□□□□ -1.77
SSX4O60224 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 AC091178.1-203ENST00000584586 279 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC107982.3-201ENST00000584957 985 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX4O60224 AC245036.5-201ENST00000596330 847 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AL590392.1-201ENST00000604960 446 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AP003117.2-201ENST00000606010 545 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC008966.2-201ENST00000606157 453 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC097478.2-201ENST00000610572 514 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AC068722.2-201ENST00000618734 544 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 AL359715.5-201ENST00000623431 443 ntBASIC3.99□□□□□ -1.77
SSX4O60224 AL356121.2-201ENST00000624715 780 ntBASIC3.99□□□□□ -1.77
SSX4O60224 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX4O60224 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX4O60224 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
SSX4O60224 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.99□□□□□ -1.77
SSX4O60224 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSX4O60224 AL122126.1-201ENST00000546905 1318 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC022893.2-201ENST00000564832 3296 ntBASIC3.98□□□□□ -1.77
SSX4O60224 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 PNPT1P2-201ENST00000456768 2050 ntBASIC3.98□□□□□ -1.77
SSX4O60224 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SSX4O60224 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SSX4O60224 Y_RNA.25-201ENST00000362528 102 ntBASIC3.98□□□□□ -1.77
SSX4O60224 RN7SKP227-201ENST00000364445 330 ntBASIC3.98□□□□□ -1.77
SSX4O60224 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SSX4O60224 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 RNU2-28P-201ENST00000410457 189 ntBASIC3.98□□□□□ -1.77
SSX4O60224 MTND4P22-201ENST00000413116 1169 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX4O60224 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX4O60224 SDCBPP2-201ENST00000424643 885 ntBASIC3.98□□□□□ -1.77
SSX4O60224 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX4O60224 COX6CP15-201ENST00000426313 211 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AL732292.1-201ENST00000426692 226 ntBASIC3.98□□□□□ -1.77
SSX4O60224 RSL24D1P6-201ENST00000426934 401 ntBASIC3.98□□□□□ -1.77
SSX4O60224 MTCO2P20-201ENST00000437339 673 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX4O60224 ELOCP8-201ENST00000439309 332 ntBASIC3.98□□□□□ -1.77
SSX4O60224 ELOCP15-201ENST00000442090 332 ntBASIC3.98□□□□□ -1.77
SSX4O60224 H2AFZP5-201ENST00000446960 382 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.98□□□□□ -1.77
SSX4O60224 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX4O60224 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 AC079168.2-201ENST00000453977 416 ntBASIC3.98□□□□□ -1.77
SSX4O60224 MTCO3P2-201ENST00000457365 171 ntBASIC3.98□□□□□ -1.77
SSX4O60224 S100A11P1-201ENST00000477525 312 ntBASIC3.98□□□□□ -1.77
SSX4O60224 GAPDHP36-201ENST00000480688 918 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX4O60224 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX4O60224 MTCYBP35-201ENST00000503630 1137 ntBASIC3.98□□□□□ -1.77
SSX4O60224 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC098862.1-201ENST00000504991 413 ntBASIC3.98□□□□□ -1.77
SSX4O60224 WBP1LP4-201ENST00000505043 344 ntBASIC3.98□□□□□ -1.77
SSX4O60224 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 MTCYBP37-201ENST00000510642 1133 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC079395.1-201ENST00000510981 262 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX4O60224 RN7SKP234-201ENST00000517173 224 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX4O60224 AP001781.1-201ENST00000530977 207 ntBASIC3.98□□□□□ -1.77
SSX4O60224 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX4O60224 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.98□□□□□ -1.77
SSX4O60224 AC073091.2-201ENST00000603205 907 ntBASIC3.98□□□□□ -1.77
SSX4O60224 YWHAQP7-201ENST00000603536 658 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AL133338.2-201ENST00000604292 736 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC131235.4-201ENST00000609288 620 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AL355493.4-201ENST00000618530 292 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC069209.1-201ENST00000619282 651 ntBASIC3.98□□□□□ -1.77
SSX4O60224 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.98□□□□□ -1.77
SSX4O60224 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX4O60224 AC097520.1-201ENST00000624435 385 ntBASIC3.98□□□□□ -1.77
SSX4O60224 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 SAGE4P-201ENST00000442271 3381 ntBASIC3.98□□□□□ -1.77
SSX4O60224 AC009951.1-201ENST00000623674 2614 ntBASIC3.98□□□□□ -1.77
SSX4O60224 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX4O60224 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SSX4O60224 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SSX4O60224 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX4O60224 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX4O60224 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.97□□□□□ -1.77
SSX4O60224 ZNF137P-201ENST00000456718 1920 ntBASIC3.97□□□□□ -1.77
SSX4O60224 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX4O60224 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX4O60224 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.97□□□□□ -1.77
SSX4O60224 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX4O60224 RNU1-15P-201ENST00000353977 144 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms