Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 ZNF33CP-201ENST00000432492 2030 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 Z99496.1-201ENST00000469424 1477 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RNU6-1066P-201ENST00000363573 105 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RNA5SP130-201ENST00000364431 114 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 SNORA72.3-201ENST00000365074 132 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 SNORA70E-201ENST00000384492 135 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RNA5SP146-201ENST00000410743 123 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RN7SKP33-201ENST00000410942 340 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 BOLA3P4-201ENST00000418151 400 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RPF2P1-201ENST00000424137 906 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 DPRXP1-201ENST00000426312 460 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC114973.1-201ENST00000429057 632 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RRM2P4-201ENST00000441721 562 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC005726.1-201ENST00000494679 427 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 MTND4LP31-201ENST00000514859 294 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 CBX3P5-201ENST00000552017 521 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC093519.1-201ENST00000566109 298 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AL121834.1-201ENST00000572284 509 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 SNORD39.3-201ENST00000584451 71 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 GAS5-AS1-201ENST00000602767 694 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC115621.1-201ENST00000604653 858 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RNU4-5P-201ENST00000607255 135 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RNU4-89P-201ENST00000607443 133 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AP000255.1-201ENST00000610276 676 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AC105429.2-201ENST00000610567 517 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 RMST_9.1-201ENST00000619945 193 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 AP001486.2-201ENST00000561652 5113 ntBASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA3F8WFD2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC025125.1-201ENST00000624743 1922 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RNU6-1226P-201ENST00000384317 107 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RNU6-921P-201ENST00000384361 107 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 MIR124-3-201ENST00000384866 87 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 MIR134-201ENST00000385258 73 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 SNORD65.1-201ENST00000390889 71 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RNU6-1300P-201ENST00000391046 108 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL121978.1-201ENST00000402778 359 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 PPIAP31-201ENST00000405422 495 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL445189.1-201ENST00000405722 338 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RPL21P65-201ENST00000406094 466 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RPS3AP9-201ENST00000417027 792 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 NANOGP5-201ENST00000424456 877 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC096632.1-201ENST00000427395 310 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RPL7P2-201ENST00000427639 268 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 MTCO1P54-201ENST00000430139 712 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 Z77249.1-201ENST00000444622 1175 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL359073.1-201ENST00000448036 403 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AP000926.1-201ENST00000479573 241 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms