Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL031666.3-201ENST00000609320 1006 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC009318.4-201ENST00000620496 486 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 MTND4P26-201ENST00000415971 1359 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL390862.1-201ENST00000635467 1469 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 MFSD8-216ENST00000641147 4009 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.46□□□□□ -1.85
SRRM4A7MD48 AC109315.1-201ENST00000584143 1347 ntBASIC3.46□□□□□ -1.85
SRRM4A7MD48 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SRRM4A7MD48 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SRRM4A7MD48 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 MIR129-1-201ENST00000384972 72 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL583835.1-201ENST00000399570 407 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 SNORA11F-201ENST00000408237 128 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL161449.1-201ENST00000414531 1199 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL161631.1-201ENST00000417933 486 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 MTND2P16-201ENST00000419987 799 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL356387.2-201ENST00000422272 243 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 TPTE2P3-201ENST00000441562 1189 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC104164.2-201ENST00000496953 495 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 OR5H5P-201ENST00000503164 928 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 WBP1LP4-201ENST00000505043 344 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC111000.3-201ENST00000508057 576 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC023141.12-201ENST00000512399 199 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 Y_RNA.717-201ENST00000517106 92 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AP001636.2-201ENST00000525517 696 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC006064.5-201ENST00000541782 248 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL109766.1-201ENST00000555080 552 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 BNIP3P24-201ENST00000593398 557 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL450336.1-201ENST00000605180 586 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC080013.4-201ENST00000607624 649 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL451074.6-201ENST00000608512 729 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AP001521.1-201ENST00000609150 300 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL354976.1-201ENST00000613843 387 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 uc_338.13-201ENST00000618243 179 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC073968.1-201ENST00000618594 637 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AL356863.1-201ENST00000623378 1080 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC120349.2-201ENST00000625002 298 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC092184.1-201ENST00000625042 715 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 CYP3A51P-201ENST00000633513 256 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC005539.1-201ENST00000443768 1479 ntBASIC3.46□□□□□ -1.86
SRRM4A7MD48 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SRRM4A7MD48 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRRM4A7MD48 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.45□□□□□ -1.86
SRRM4A7MD48 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SRRM4A7MD48 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRRM4A7MD48 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRRM4A7MD48 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRRM4A7MD48 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.45□□□□□ -1.86
SRRM4A7MD48 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRRM4A7MD48 AC103591.2-201ENST00000265259 766 ntBASIC3.45□□□□□ -1.86
SRRM4A7MD48 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms