Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC012254.4-201ENST00000588843 273 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC067852.3-201ENST00000589177 561 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 HMGB1P50-201ENST00000605814 607 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 CFTRP2-201ENST00000634304 199 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AL356274.2-201ENST00000624379 3752 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
SMIM28A0A1B0GU29 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SMIM28A0A1B0GU29 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.81
SMIM28A0A1B0GU29 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RNA5SP322-201ENST00000363617 119 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 OR52E6-202ENST00000379946 954 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RNU4-31P-201ENST00000384211 141 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RSL24D1P1-201ENST00000404972 493 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 HMGB1P13-201ENST00000406019 642 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 TATDN1P1-201ENST00000414123 891 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AL445183.3-201ENST00000414168 502 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 OR1AA1P-201ENST00000419597 916 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RWDD4P2-201ENST00000426392 563 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC005300.1-201ENST00000428401 373 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AP000949.1-201ENST00000438328 629 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 ARL5AP2-201ENST00000444698 533 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RPS3AP50-201ENST00000487064 803 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RWDD4P1-201ENST00000488019 565 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC104229.1-201ENST00000561364 255 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AP003117.1-201ENST00000602771 554 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC092574.1-201ENST00000609771 420 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 MIR8084-201ENST00000614105 89 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC123768.4-201ENST00000616244 701 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMIM28A0A1B0GU29 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 OR10J6P-201ENST00000289731 930 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 ZNF603P-201ENST00000405613 487 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 HMGB3P18-201ENST00000406327 590 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 VTA1P1-201ENST00000414044 866 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC017083.1-201ENST00000428093 483 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC005326.1-201ENST00000429197 123 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 RPL7P29-201ENST00000437151 728 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AL353093.1-201ENST00000441292 436 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC104978.1-201ENST00000449387 391 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 MTND2P8-201ENST00000450555 1025 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 RN7SL601P-201ENST00000471221 293 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC073522.1-201ENST00000483312 377 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 RPL32P34-201ENST00000486380 400 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 FCF1P8-201ENST00000510322 597 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 NARSP2-201ENST00000518524 679 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 OR5AK3P-201ENST00000527486 1297 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 OR4R2P-201ENST00000530815 597 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC025260.1-201ENST00000548858 430 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AL121576.1-201ENST00000556055 276 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms