Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPL39P38-201ENST00000467018 153 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 MTND1P19-201ENST00000511780 315 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AC078899.1-201ENST00000521432 1185 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 DLEU2_5.1-201ENST00000615567 84 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 RN7SL544P-201ENST00000617232 284 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 RN7SL763P-201ENST00000620922 284 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 U6.114-201ENST00000636407 96 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 BIN2P1-201ENST00000504996 1530 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AC006600.2-201ENST00000624834 2506 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PHF8Q9UPP1 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC025809.2-201ENST00000625085 1802 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 Y_RNA.404-201ENST00000383978 102 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RNU6-171P-201ENST00000384354 107 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 ARF4P3-201ENST00000397387 509 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RPL21P1-201ENST00000399532 476 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MIR1252-201ENST00000408861 65 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RNU2-36P-201ENST00000410361 191 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 OR2AT2P-201ENST00000413438 905 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RPL36AP36-201ENST00000418616 301 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RPS17P17-201ENST00000419392 409 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 CYP4F30P-202ENST00000420048 405 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 COX6CP15-201ENST00000426313 211 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC079922.1-201ENST00000443291 359 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC005008.1-201ENST00000456151 612 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RPS23P6-201ENST00000466136 431 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AL133445.1-201ENST00000467051 452 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AP000893.1-201ENST00000474462 794 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 RPS26P24-201ENST00000497656 331 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 DPPA3P2-201ENST00000553589 478 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 OR11H5P-201ENST00000554039 926 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MIR3189-201ENST00000578735 73 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MIR1269B-201ENST00000580405 75 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC008687.2-201ENST00000597865 520 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 FTX_2.1-201ENST00000618816 94 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC103858.2-201ENST00000621471 543 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AL606534.2-204ENST00000635008 178 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AC127070.3-201ENST00000503695 3263 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 FER-202ENST00000438717 1531 ntTSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 AP001541.1-201ENST00000623322 1904 ntBASIC8.27□□□□□ -1.09
PHF8Q9UPP1 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
PHF8Q9UPP1 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 AC002525.1-201ENST00000624392 1622 ntBASIC8.26□□□□□ -1.09
PHF8Q9UPP1 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 Y_RNA.39-201ENST00000362620 98 ntBASIC8.26□□□□□ -1.09
PHF8Q9UPP1 RNU6-562P-201ENST00000362731 107 ntBASIC8.26□□□□□ -1.09
PHF8Q9UPP1 U3.7-201ENST00000363668 216 ntBASIC8.26□□□□□ -1.09
PHF8Q9UPP1 SNORA74A-201ENST00000364089 198 ntBASIC8.26□□□□□ -1.09
PHF8Q9UPP1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.26□□□□□ -1.09
PHF8Q9UPP1 RPL36P18-201ENST00000419316 318 ntBASIC8.26□□□□□ -1.09
PHF8Q9UPP1 E2F6P2-201ENST00000420708 748 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms