Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 KPNA2P3-201ENST00000584190 848 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 SNORD39.3-201ENST00000584451 71 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 U73023.1-201ENST00000603134 700 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC068276.1-201ENST00000605793 379 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AL031775.1-201ENST00000607014 887 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC104073.3-201ENST00000610942 955 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC025594.3-201ENST00000613068 790 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AL590240.3-201ENST00000621416 943 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC125257.1-201ENST00000560400 2930 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC021242.1-201ENST00000507315 2035 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 Z95331.1-201ENST00000623075 23112 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 A2MP1-204ENST00000566278 4130 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.34□□□□□ -1.56
VTA1Q9NP79 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VTA1Q9NP79 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
VTA1Q9NP79 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
VTA1Q9NP79 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
VTA1Q9NP79 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 MTCO1P23-201ENST00000415223 1526 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 ZNF137P-201ENST00000456718 1920 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC108751.5-201ENST00000492880 1336 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 RNU6-374P-201ENST00000364146 108 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 RNU6-723P-201ENST00000383973 107 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 CTSL3P-202ENST00000412179 788 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AL592293.2-201ENST00000422292 996 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC234779.1-201ENST00000425910 285 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 SNRPEP7-201ENST00000438350 220 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 CYCSP24-201ENST00000445119 316 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 ELOCP30-201ENST00000447108 299 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 ARPC3P5-201ENST00000448802 534 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 EIF4A1P11-201ENST00000451239 222 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 TRBV26-201ENST00000456572 344 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 RPL36AP41-201ENST00000493820 306 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 MTCYBP17-201ENST00000503579 789 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 RN7SKP122-201ENST00000515923 296 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 RPL23AP53-201ENST00000521854 457 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AP002963.1-201ENST00000530590 184 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC090181.2-201ENST00000602975 672 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC008782.1-201ENST00000603386 430 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC112187.2-201ENST00000604345 283 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AP000254.1-201ENST00000609934 520 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AL359740.1-201ENST00000624340 592 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AL049536.1-201ENST00000625043 744 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC025048.6-202ENST00000627667 438 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC011755.1-201ENST00000623763 2049 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 AC073136.1-201ENST00000449426 2884 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 CR383658.2-201ENST00000547576 1525 ntBASIC5.33□□□□□ -1.56
VTA1Q9NP79 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VTA1Q9NP79 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VTA1Q9NP79 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VTA1Q9NP79 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 SAGE2P-201ENST00000420011 2126 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VTA1Q9NP79 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VTA1Q9NP79 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 SNORA71.2-201ENST00000364941 134 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VTA1Q9NP79 RNU6-146P-201ENST00000384602 108 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 RNU6-192P-201ENST00000391253 100 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL049693.1-201ENST00000402760 611 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL023807.1-201ENST00000407932 359 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 RN7SKP142-201ENST00000411236 328 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL663109.1-201ENST00000411498 844 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC006366.1-201ENST00000422002 759 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 CYCSP46-201ENST00000423569 204 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL158073.1-201ENST00000426848 1104 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms