Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF31Q96EP0 AL731566.1-201ENST00000620490 1937 ntBASIC4.81□□□□□ -1.64
RNF31Q96EP0 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
RNF31Q96EP0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF31Q96EP0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF31Q96EP0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF31Q96EP0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC016716.1-201ENST00000265882 708 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 RN7SKP226-201ENST00000364912 300 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 Y_RNA.303-201ENST00000364998 94 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 RNU6-178P-201ENST00000384631 104 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AL359643.1-201ENST00000404109 423 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 RNU6-272P-201ENST00000411028 104 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 BMS1P19-201ENST00000433925 393 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AL121601.2-201ENST00000438019 707 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 MTND4P25-201ENST00000441039 533 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AL671855.1-201ENST00000446875 1203 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC239367.2-201ENST00000447309 705 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 TRGVB-201ENST00000453257 471 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 RNA5SP103-201ENST00000459503 118 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 NPM1P6-201ENST00000521088 871 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AF279873.1-201ENST00000523393 313 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 RPS3AP4-201ENST00000555161 764 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 ZNF519P2-201ENST00000557032 169 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC209154.1-201ENST00000582156 337 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AL008729.2-201ENST00000606393 473 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC069234.5-201ENST00000611056 416 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 CDRT1-208ENST00000630868 794 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 OR5AK4P-201ENST00000635912 903 ntBASIC4.8□□□□□ -1.64
RNF31Q96EP0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF31Q96EP0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF31Q96EP0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF31Q96EP0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF31Q96EP0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF31Q96EP0 AL450326.2-201ENST00000421913 1962 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF31Q96EP0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 MIR506-201ENST00000384998 124 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 RPL17P50-201ENST00000396131 546 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 AL390316.1-201ENST00000406279 553 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 MIR1271-201ENST00000408537 86 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 RN7SKP16-201ENST00000410180 299 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 RNU2-50P-201ENST00000410494 143 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 HMGN1P14-201ENST00000412459 517 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 OFD1P18Y-201ENST00000420889 959 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 MTCO3P1-205ENST00000422088 832 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 AC099336.2-201ENST00000422457 254 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 MTCO2P19-201ENST00000427513 598 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 VDAC1P6-201ENST00000430062 855 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 MTND3P21-201ENST00000433774 331 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF31Q96EP0 AC108463.1-201ENST00000450258 347 ntBASIC4.79□□□□□ -1.64
RNF31Q96EP0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms