Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU1-108P-201ENST00000362556 161 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AL121834.1-202ENST00000404494 277 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AL356967.1-201ENST00000406305 431 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 Z74021.1-201ENST00000423610 407 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 MTND4P20-201ENST00000424125 869 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 RPL31P54-201ENST00000429803 370 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 Z83846.1-201ENST00000446798 265 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 DHFRP3-201ENST00000455595 559 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC021146.8-201ENST00000507455 733 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 ELOCP32-201ENST00000548625 324 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 IPO5P1-202ENST00000600039 287 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC020910.2-201ENST00000603635 610 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 AC139769.1-204ENST00000472297 1931 ntBASIC4.1□□□□□ -1.75
BEST3Q8N1M1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
BEST3Q8N1M1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC011155.1-201ENST00000316512 456 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 OR5H2-201ENST00000355273 945 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 Y_RNA.169-201ENST00000363745 96 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 MIR506-201ENST00000384998 124 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 MIR921-201ENST00000401133 56 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC004975.1-201ENST00000428733 208 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AL354941.1-201ENST00000438600 464 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 MTND5P2-201ENST00000442927 1142 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AL133217.1-201ENST00000450980 425 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 RPL23AP65-201ENST00000475608 468 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC113430.1-201ENST00000506872 718 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 RNA5SP497-201ENST00000516081 97 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 NPM1P6-201ENST00000521088 871 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC008015.1-201ENST00000555505 465 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 PSMB7P1-201ENST00000556349 514 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC091178.1-203ENST00000584586 279 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC113403.1-201ENST00000604910 193 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC091946.2-201ENST00000606105 291 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC090948.2-201ENST00000607363 564 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 RNU6-156P-201ENST00000621869 107 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AC098679.5-201ENST00000624394 571 ntBASIC4.09□□□□□ -1.75
BEST3Q8N1M1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BEST3Q8N1M1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
BEST3Q8N1M1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
BEST3Q8N1M1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.09□□□□□ -1.76
BEST3Q8N1M1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
BEST3Q8N1M1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.09□□□□□ -1.76
BEST3Q8N1M1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms