Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC008966.2-201ENST00000606157 453 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC005962.2-201ENST00000611427 652 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC243773.3-201ENST00000613270 256 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC009318.4-201ENST00000620496 486 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC120349.3-201ENST00000624377 529 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 MTND4P34-201ENST00000572715 1371 ntBASIC4.73□□□□□ -1.65
CCDC38Q502W7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC38Q502W7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CCDC38Q502W7 GDI2P1-201ENST00000429312 1336 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 KARSP3-201ENST00000571212 1504 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 IQCB2P-201ENST00000401788 1633 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 RNU6-931P-201ENST00000363850 107 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 RNA5SP151-201ENST00000365632 117 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 MIR550A3-201ENST00000390735 95 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL139128.1-201ENST00000413921 941 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 RPL21P91-201ENST00000429231 479 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 RPL7P34-201ENST00000433316 712 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 MTND4P6-201ENST00000438297 472 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL590399.6-201ENST00000446396 307 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 RSL24D1P3-201ENST00000449255 495 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC009963.2-201ENST00000453431 138 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 PABPC1P3-201ENST00000469174 459 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC012158.1-204ENST00000483430 465 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 MTCYBP17-201ENST00000503579 789 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 SCARNA22-201ENST00000503991 125 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 TMEM248P1-201ENST00000510579 951 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC026412.2-201ENST00000512270 1075 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 MTND3P12-201ENST00000559068 328 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 BGLT3-201ENST00000564523 994 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC145350.1-201ENST00000567426 208 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 MIR4637-201ENST00000582405 84 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC091178.1-203ENST00000584586 279 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 BNIP3P24-201ENST00000593398 557 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 CLIC4P2-201ENST00000601934 717 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC010680.3-201ENST00000604215 520 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC112220.3-201ENST00000605502 502 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC091304.6-201ENST00000619761 202 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC097655.1-201ENST00000635075 318 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 U6.101-201ENST00000637707 76 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL079343.1-201ENST00000572358 1771 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AC026951.1-201ENST00000559530 2459 ntBASIC4.72□□□□□ -1.65
CCDC38Q502W7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC38Q502W7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC38Q502W7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC38Q502W7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.71□□□□□ -1.65
CCDC38Q502W7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC38Q502W7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 RN7SKP115-201ENST00000363177 317 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 MIR585-201ENST00000384887 94 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL049545.1-201ENST00000401856 572 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms