Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P09429 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P09429 AC116353.3-201ENST00000511215 249 ntBASIC5.58□□□□□ -1.52
HMGB1P09429 AC109445.1-201ENST00000512356 383 ntBASIC5.58□□□□□ -1.52
HMGB1P09429 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P09429 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P09429 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P09429 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB1P09429 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P09429 AL031176.1-201ENST00000604554 466 ntBASIC5.58□□□□□ -1.52
HMGB1P09429 AC133644.2-201ENST00000608142 540 ntBASIC5.58□□□□□ -1.52
HMGB1P09429 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB1P09429 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMGB1P09429 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB1P09429 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P09429 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P09429 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
HMGB1P09429 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB1P09429 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HMGB1P09429 Y_RNA.192-201ENST00000363977 102 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 UBBP2-201ENST00000376781 231 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 RNU1-82P-201ENST00000390851 165 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 CYCSP45-201ENST00000402289 315 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AL137014.1-201ENST00000420490 1226 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB1P09429 USP9YP11-201ENST00000427537 717 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AC008072.1-201ENST00000434254 824 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AC079168.2-201ENST00000453977 416 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 RPL23AP31-201ENST00000456160 467 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB1P09429 ACTG1P13-201ENST00000486987 1043 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 RPL7P38-201ENST00000488396 739 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB1P09429 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGB1P09429 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB1P09429 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB1P09429 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGB1P09429 OR4K7P-201ENST00000580232 945 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 MIR3667-201ENST00000581025 74 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AC008536.1-201ENST00000602872 669 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 COX6CP4-201ENST00000605798 228 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P09429 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB1P09429 AF117829.1-206ENST00000621883 3802 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AL356585.4-201ENST00000623078 1229 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 OR4G3P-201ENST00000633500 913 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HMGB1P09429 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HMGB1P09429 SDAD1P1-202ENST00000524156 2051 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AC131971.1-201ENST00000332881 1482 ntBASIC5.57□□□□□ -1.52
HMGB1P09429 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGB1P09429 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMGB1P09429 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB1P09429 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HMGB1P09429 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB1P09429 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB1P09429 RNU6-1242P-201ENST00000391052 103 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AL031679.1-201ENST00000400616 525 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 MIR921-201ENST00000401133 56 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 RN7SKP267-201ENST00000410381 285 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 RPL23AP26-201ENST00000412728 464 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 BX510359.2-201ENST00000417920 305 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC073648.4-201ENST00000442655 781 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AL359073.1-201ENST00000448036 403 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 HIGD1AP8-201ENST00000453927 274 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 U3.44-201ENST00000458938 192 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 FAM172BP-201ENST00000487497 1089 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB1P09429 GTF2IP9-201ENST00000502460 301 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC093720.1-201ENST00000505681 714 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 NDUFB5P1-201ENST00000508134 564 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB1P09429 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGB1P09429 HSPA8P13-201ENST00000523715 472 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGB1P09429 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGB1P09429 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGB1P09429 AP001880.2-201ENST00000538233 448 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB1P09429 AC084824.1-201ENST00000550917 1005 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGB1P09429 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGB1P09429 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB1P09429 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB1P09429 BNIP3P40-201ENST00000596017 556 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC004987.4-201ENST00000603383 338 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC013244.1-201ENST00000604279 193 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AL163642.2-201ENST00000604722 1019 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AC211433.2-201ENST00000608433 387 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AL391497.1-201ENST00000608671 547 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AL355810.1-201ENST00000614629 552 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 AL121873.1-201ENST00000616013 524 ntBASIC5.56□□□□□ -1.52
HMGB1P09429 RMST_9.1-201ENST00000619945 193 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms