Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC118465.1-201ENST00000513820 1271 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 RNU6-1102P-201ENST00000516149 96 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 HAUS1P3-201ENST00000523909 662 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 C1DP5-201ENST00000525775 383 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.14□□□□□ -1.75
COL2A1P02458 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.14□□□□□ -1.75
COL2A1P02458 NCAPGP2-201ENST00000557911 754 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 ZNF971P-201ENST00000562068 1249 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 AC010653.1-201ENST00000571108 881 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 AC080013.6-201ENST00000606185 215 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.14□□□□□ -1.75
COL2A1P02458 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.14□□□□□ -1.75
COL2A1P02458 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
COL2A1P02458 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL2A1P02458 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 KPNA2P2-201ENST00000419546 1489 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 FRG1CP-201ENST00000358464 769 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 Y_RNA.318-201ENST00000365131 97 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 RNU6-152P-201ENST00000384037 107 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 USP9YP21-201ENST00000420603 432 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC073508.1-201ENST00000428866 656 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 MTCO1P57-201ENST00000432182 261 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 MTCYBP31-201ENST00000438855 1122 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 RPS29P31-201ENST00000446147 164 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 MTND1P27-201ENST00000451117 902 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 RPL26P28-201ENST00000451325 435 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 RPL21P10-201ENST00000463521 490 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AP000942.1-201ENST00000463969 747 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC020893.1-201ENST00000502452 580 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.13□□□□□ -1.75
COL2A1P02458 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC097462.2-201ENST00000504623 481 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC010285.3-201ENST00000511668 676 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC010342.1-201ENST00000514047 877 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC021451.1-201ENST00000523498 1129 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 UBTFL10-201ENST00000528532 562 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.13□□□□□ -1.75
COL2A1P02458 ZNF92P3-201ENST00000596594 954 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 AC068790.5-201ENST00000602741 355 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 U6.48-201ENST00000618523 106 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AL713922.2-201ENST00000619384 716 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
COL2A1P02458 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.13□□□□□ -1.75
COL2A1P02458 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 DDX43P2-201ENST00000604753 1354 ntBASIC4.13□□□□□ -1.75
COL2A1P02458 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL2A1P02458 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL2A1P02458 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 RNU6-301P-201ENST00000384277 107 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 ELOCP11-201ENST00000436690 332 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.12□□□□□ -1.75
COL2A1P02458 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.12□□□□□ -1.75
COL2A1P02458 ELOCP16-201ENST00000444494 332 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL2A1P02458 ANP32BP2-201ENST00000454525 545 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 NPM1P17-201ENST00000479221 602 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 METTL15P1-201ENST00000481421 1045 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 MTND4P2-201ENST00000507767 1203 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL2A1P02458 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.12□□□□□ -1.75
COL2A1P02458 RNU6-334P-201ENST00000517072 102 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.12□□□□□ -1.75
COL2A1P02458 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.12□□□□□ -1.75
COL2A1P02458 OR10D4P-201ENST00000525892 951 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.12□□□□□ -1.75
COL2A1P02458 NPM1P35-201ENST00000533043 868 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms