Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU2-65P-201ENST00000410162 185 ntBASIC4.2□□□□□ -1.74
LDLRP01130 RN7SKP267-201ENST00000410381 285 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AL513175.2-201ENST00000422071 443 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 RPS6P15-201ENST00000431996 751 ntBASIC4.2□□□□□ -1.74
LDLRP01130 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.2□□□□□ -1.74
LDLRP01130 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.2□□□□□ -1.74
LDLRP01130 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.2□□□□□ -1.74
LDLRP01130 AC109471.1-201ENST00000511631 612 ntBASIC4.2□□□□□ -1.74
LDLRP01130 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.2□□□□□ -1.74
LDLRP01130 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 PHBP17-201ENST00000528576 541 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 AC125611.1-201ENST00000549563 229 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.2□□□□□ -1.74
LDLRP01130 AC009097.3-201ENST00000563557 1018 ntBASIC4.2□□□□□ -1.74
LDLRP01130 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.2□□□□□ -1.74
LDLRP01130 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.2□□□□□ -1.74
LDLRP01130 RPL23AP97-201ENST00000568955 471 ntBASIC4.2□□□□□ -1.74
LDLRP01130 RN7SL652P-201ENST00000577769 300 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.2□□□□□ -1.74
LDLRP01130 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.2□□□□□ -1.74
LDLRP01130 AC006130.2-201ENST00000586202 326 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 AC113368.1-201ENST00000603736 382 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC091488.1-201ENST00000604239 660 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 AC099676.1-201ENST00000608886 657 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AL592148.2-201ENST00000612210 372 ntBASIC4.2□□□□□ -1.74
LDLRP01130 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 AC009090.3-201ENST00000616553 565 ntBASIC4.2□□□□□ -1.74
LDLRP01130 OR1S1-201ENST00000624470 978 ntBASIC4.2□□□□□ -1.74
LDLRP01130 RNA5SP196-201ENST00000625967 102 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC087821.2-201ENST00000637086 450 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AC022031.1-201ENST00000585985 2593 ntBASIC4.2□□□□□ -1.74
LDLRP01130 AL118496.1-201ENST00000440201 1812 ntBASIC4.2□□□□□ -1.74
LDLRP01130 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LDLRP01130 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 AC015813.6-201ENST00000624409 5808 ntBASIC4.19□□□□□ -1.74
LDLRP01130 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 AC016716.1-201ENST00000265882 708 ntBASIC4.19□□□□□ -1.74
LDLRP01130 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LDLRP01130 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LDLRP01130 AL603766.1-201ENST00000407763 664 ntBASIC4.19□□□□□ -1.74
LDLRP01130 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.19□□□□□ -1.74
LDLRP01130 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 OR51A3P-201ENST00000413596 924 ntBASIC4.19□□□□□ -1.74
LDLRP01130 Z75741.2-201ENST00000417272 1167 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC009518.2-201ENST00000418056 731 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC140479.3-201ENST00000418944 1126 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AL356387.2-201ENST00000422272 243 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.19□□□□□ -1.74
LDLRP01130 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 USP9YP14-201ENST00000430663 563 ntBASIC4.19□□□□□ -1.74
LDLRP01130 CR769776.1-201ENST00000441254 787 ntBASIC4.19□□□□□ -1.74
LDLRP01130 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.19□□□□□ -1.74
LDLRP01130 PHBP16-201ENST00000446318 950 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 AC108463.1-201ENST00000450258 347 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC233982.1-201ENST00000451247 436 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 AC010468.1-201ENST00000461022 817 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.19□□□□□ -1.74
LDLRP01130 S100A11P1-201ENST00000477525 312 ntBASIC4.19□□□□□ -1.74
LDLRP01130 RPL23AP44-201ENST00000482216 473 ntBASIC4.19□□□□□ -1.74
LDLRP01130 RPL36AP41-201ENST00000493820 306 ntBASIC4.19□□□□□ -1.74
LDLRP01130 RPL7L1P13-201ENST00000511702 739 ntBASIC4.19□□□□□ -1.74
LDLRP01130 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 MRPS36P3-201ENST00000519284 130 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.19□□□□□ -1.74
LDLRP01130 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 AC025884.1-201ENST00000556034 378 ntBASIC4.19□□□□□ -1.74
LDLRP01130 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.19□□□□□ -1.74
LDLRP01130 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.19□□□□□ -1.74
LDLRP01130 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.19□□□□□ -1.74
LDLRP01130 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.19□□□□□ -1.74
LDLRP01130 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.19□□□□□ -1.74
LDLRP01130 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 PIGPP4-201ENST00000584447 307 ntBASIC4.19□□□□□ -1.74
LDLRP01130 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms