Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KDELR3O43731 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KDELR3O43731 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KDELR3O43731 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
KDELR3O43731 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
KDELR3O43731 USP8P1-201ENST00000494673 3183 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 AC068647.1-201ENST00000489539 2265 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 RNA5SP119-201ENST00000362715 117 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 RNA5SP189-201ENST00000364920 115 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 RNA5SP235-201ENST00000365411 114 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 RNU2-65P-201ENST00000410162 185 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC017079.2-201ENST00000416102 485 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 OSTCP5-201ENST00000425293 453 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 ATP5JP1-201ENST00000431631 322 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AL035458.1-201ENST00000433096 585 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
KDELR3O43731 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.58□□□□□ -1.84
KDELR3O43731 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.58□□□□□ -1.84
KDELR3O43731 AC007537.2-201ENST00000472093 511 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 SETP14-201ENST00000497538 873 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC078918.1-201ENST00000498515 228 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC093755.1-201ENST00000512950 1023 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 OR8L1P-201ENST00000534005 955 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.58□□□□□ -1.84
KDELR3O43731 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.58□□□□□ -1.84
KDELR3O43731 AC141257.3-201ENST00000572906 215 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.58□□□□□ -1.84
KDELR3O43731 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.58□□□□□ -1.84
KDELR3O43731 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.58□□□□□ -1.84
KDELR3O43731 AC103710.3-201ENST00000608157 948 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AL357559.1-201ENST00000622228 274 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC024023.1-201ENST00000624530 922 ntBASIC3.58□□□□□ -1.84
KDELR3O43731 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.58□□□□□ -1.84
KDELR3O43731 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
KDELR3O43731 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
KDELR3O43731 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.58□□□□□ -1.84
KDELR3O43731 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KDELR3O43731 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KDELR3O43731 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
KDELR3O43731 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KDELR3O43731 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
KDELR3O43731 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KDELR3O43731 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KDELR3O43731 MIR670-201ENST00000390142 98 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.57□□□□□ -1.84
KDELR3O43731 RNU2-37P-201ENST00000410695 177 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 RNU4-74P-201ENST00000411280 161 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 AL512504.1-201ENST00000415494 778 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.57□□□□□ -1.84
KDELR3O43731 AL592494.2-201ENST00000425455 1548 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.57□□□□□ -1.84
KDELR3O43731 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 USP9YP5-201ENST00000511770 630 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 RNU4-60P-201ENST00000517239 135 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.57□□□□□ -1.84
KDELR3O43731 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.57□□□□□ -1.84
KDELR3O43731 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.57□□□□□ -1.84
KDELR3O43731 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.57□□□□□ -1.84
KDELR3O43731 AC008739.3-201ENST00000603262 127 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 AC006946.3-201ENST00000609791 756 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 MIR6075-201ENST00000620782 95 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 AL049781.1-201ENST00000623195 3585 ntBASIC3.57□□□□□ -1.84
KDELR3O43731 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KDELR3O43731 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
KDELR3O43731 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
KDELR3O43731 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KDELR3O43731 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.56□□□□□ -1.84
KDELR3O43731 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
KDELR3O43731 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KDELR3O43731 MIR23B-201ENST00000384832 97 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.56□□□□□ -1.84
KDELR3O43731 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KDELR3O43731 NUP35P2-201ENST00000416748 943 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 AC068533.1-201ENST00000418542 415 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 BX842559.1-201ENST00000419615 532 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.56□□□□□ -1.84
KDELR3O43731 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.56□□□□□ -1.84
KDELR3O43731 AL389915.1-201ENST00000422463 466 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 BMS1P19-201ENST00000433925 393 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 XKRYP6-201ENST00000440468 1116 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 XKRYP3-201ENST00000442113 1116 ntBASIC3.56□□□□□ -1.84
KDELR3O43731 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
KDELR3O43731 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.56□□□□□ -1.84
KDELR3O43731 COX6B1P6-201ENST00000522347 255 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms