Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC022832.1-201ENST00000530718 645 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AP000873.5-201ENST00000533906 236 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 FKBP1BP1-201ENST00000553366 325 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 AC012414.6-201ENST00000568241 401 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC025588.3-201ENST00000604182 274 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL133338.2-201ENST00000604292 736 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC239868.4-201ENST00000608318 671 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC009878.1-201ENST00000621819 340 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL353662.3-201ENST00000625131 237 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL022578.1-201ENST00000439330 1433 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PHGDHO43175 MAPK10-304ENST00000641341 3984 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PHGDHO43175 U8.4-201ENST00000363626 134 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RNU6-777P-201ENST00000364265 104 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PHGDHO43175 RNY3P10-201ENST00000384764 102 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RNU6-952P-201ENST00000391164 108 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AL031679.1-201ENST00000400616 525 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AL356473.1-201ENST00000406203 1408 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 PGBD4P8-201ENST00000412993 562 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC109780.2-201ENST00000413467 845 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RPL31P2-201ENST00000413849 377 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.76□□□□□ -1.65
PHGDHO43175 AL389915.1-201ENST00000422463 466 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 RPS17P8-201ENST00000434525 335 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AL356276.2-201ENST00000435919 558 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RPL7P11-201ENST00000437586 658 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.76□□□□□ -1.65
PHGDHO43175 MTND6P18-201ENST00000439477 513 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 MTND5P14-201ENST00000441481 1267 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 SAGE4P-201ENST00000442271 3381 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 MTCO1P19-201ENST00000443487 500 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 MRPL48P1-201ENST00000445390 636 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.76□□□□□ -1.65
PHGDHO43175 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 NDUFA12P1-201ENST00000455914 406 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AL445433.1-201ENST00000457507 257 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RPL37P6-202ENST00000464216 403 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 PABPC1P3-201ENST00000469174 459 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.76□□□□□ -1.65
PHGDHO43175 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.76□□□□□ -1.65
PHGDHO43175 AC022861.1-201ENST00000522981 663 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC068587.4-201ENST00000533893 186 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 OR5AN2P-201ENST00000534535 896 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 RARSP1-201ENST00000542842 1418 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PHGDHO43175 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.76□□□□□ -1.65
PHGDHO43175 AC005084.1-201ENST00000605160 304 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC068276.1-201ENST00000605793 379 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 AC103591.3-201ENST00000608684 209 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 AC092656.1-203ENST00000624134 423 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 AC025048.6-202ENST00000627667 438 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PHGDHO43175 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PHGDHO43175 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PHGDHO43175 DHX9P1-201ENST00000436565 3076 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.76□□□□□ -1.65
PHGDHO43175 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.75□□□□□ -1.65
PHGDHO43175 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PHGDHO43175 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHGDHO43175 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PHGDHO43175 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.75□□□□□ -1.65
PHGDHO43175 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PHGDHO43175 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PHGDHO43175 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PHGDHO43175 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PHGDHO43175 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PHGDHO43175 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.75□□□□□ -1.65
PHGDHO43175 RPS24P12-201ENST00000402084 394 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 AL080315.1-201ENST00000406055 466 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.75□□□□□ -1.65
PHGDHO43175 MTCO2P34-201ENST00000421994 607 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 AL355433.1-201ENST00000422804 300 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 OR51AB1P-201ENST00000429046 620 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 DLGAP5P1-201ENST00000430307 464 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.75□□□□□ -1.65
PHGDHO43175 PRELID3BP10-201ENST00000431957 584 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 LSM1P1-201ENST00000438629 273 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.75□□□□□ -1.65
PHGDHO43175 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.75□□□□□ -1.65
PHGDHO43175 BX322784.1-201ENST00000455793 1077 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 AP000942.1-201ENST00000463969 747 ntBASIC4.75□□□□□ -1.65
PHGDHO43175 AC091564.1-201ENST00000464563 479 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms