Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC021146.8-201ENST00000507455 733 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 MTND3P5-201ENST00000512798 333 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 MIR4504-201ENST00000577413 92 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 MIR4719-201ENST00000585233 84 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 IMMP1LP1-201ENST00000605170 488 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC105129.3-201ENST00000605455 485 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 AL603755.1-201ENST00000619504 163 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC007490.1-201ENST00000624321 703 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC103706.2-201ENST00000638080 240 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 AL049555.1-201ENST00000562834 1933 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 AP001273.1-201ENST00000624493 3152 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 ELL2P4-201ENST00000446870 1376 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 AL122126.1-201ENST00000546905 1318 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 Z95327.2-201ENST00000414579 1873 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 LINC00561-201ENST00000565815 2738 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 RNU6-216P-201ENST00000363282 104 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 RNU5A-2P-201ENST00000384337 116 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AL133384.1-201ENST00000412744 351 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM38O00635 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 RPL18P10-201ENST00000425606 538 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC008065.1-201ENST00000428525 348 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 RPL7P31-201ENST00000450192 724 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 RPL12P26-201ENST00000452430 487 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 MTCO3P2-201ENST00000457365 171 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 ARL4AP1-201ENST00000503220 705 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC010460.1-201ENST00000507087 466 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 MTND5P13-201ENST00000513046 1079 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 RNU6-1129P-201ENST00000515964 104 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 RN7SKP92-201ENST00000517266 244 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 RPL12P22-201ENST00000519073 490 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 MTND2P26-201ENST00000528255 1029 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM38O00635 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM38O00635 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM38O00635 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 HNRNPCP4-201ENST00000571636 900 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 ZNF415P1-201ENST00000582279 1166 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC067852.4-201ENST00000590314 478 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AP000403.1-201ENST00000603349 851 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC131235.4-201ENST00000609288 620 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC019193.2-201ENST00000610012 634 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 U6.42-201ENST00000618440 107 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 MIR6853-201ENST00000619642 74 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC073530.2-201ENST00000623987 261 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 AC120349.2-201ENST00000625002 298 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM38O00635 AC116618.1-201ENST00000634617 774 ntBASIC4.8□□□□□ -1.64
TRIM38O00635 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
TRIM38O00635 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM38O00635 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM38O00635 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms