Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC022034.3-201ENST00000471393 478 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 RPL23AP72-201ENST00000492447 435 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC113430.1-201ENST00000506872 718 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL389895.1-201ENST00000554127 252 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 HIGD1AP17-201ENST00000554576 276 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 MTND4P33-201ENST00000556706 766 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL132657.2-201ENST00000564417 358 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 OR4K7P-201ENST00000580232 945 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC007448.1-201ENST00000582714 234 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL139395.1-201ENST00000603662 160 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL354984.3-201ENST00000604803 325 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC004908.3-201ENST00000610248 625 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC097478.2-201ENST00000610572 514 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC078899.5-201ENST00000612475 178 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC008083.4-201ENST00000615076 444 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL158196.1-201ENST00000616786 434 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC121761.2-201ENST00000617300 689 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL158163.2-201ENST00000619110 700 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AC007546.1-201ENST00000619452 559 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 AL078595.3-201ENST00000623815 1166 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 OR6C71P-202ENST00000641886 1107 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 OR56B2P-202ENST00000641377 2453 ntBASIC3.48□□□□□ -1.85
SRRM4A7MD48 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.48□□□□□ -1.85
SRRM4A7MD48 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRRM4A7MD48 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL359893.1-201ENST00000447628 1580 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 OR5P1P-201ENST00000299512 925 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 RN7SKP44-201ENST00000363602 316 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 RNA5SP175-201ENST00000364275 119 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 RNA5SP505-201ENST00000364748 108 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 RNU6-1122P-201ENST00000384449 107 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 RPS16P5-201ENST00000406501 404 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 RPS23P10-201ENST00000416185 486 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL590139.1-201ENST00000416267 400 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC092832.1-201ENST00000422934 400 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 MOB1AP1-201ENST00000430903 535 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL050321.1-201ENST00000432363 400 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AL356276.2-201ENST00000435919 558 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 CR769776.1-201ENST00000441254 787 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 ACTG1P13-201ENST00000486987 1043 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC231760.1-201ENST00000498002 260 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC098862.1-201ENST00000504991 413 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC093720.1-201ENST00000505681 714 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 MTCYBP37-201ENST00000510642 1133 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 RN7SKP92-201ENST00000517266 244 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC023050.2-201ENST00000544968 387 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 CYP4A43P-201ENST00000568156 121 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC005412.1-201ENST00000580812 1049 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 RPL12P25-202ENST00000598100 674 ntBASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.47□□□□□ -1.85
SRRM4A7MD48 AC008638.3-201ENST00000603341 463 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms