Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC092832.1-201ENST00000422934 400 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 VN1R42P-201ENST00000424651 344 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC078857.1-201ENST00000469870 667 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 GAPDHP36-201ENST00000480688 918 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RPL23AP44-201ENST00000482216 473 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC012170.1-201ENST00000495139 359 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC110768.1-201ENST00000509222 400 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC133963.2-201ENST00000513686 578 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AL121594.4-201ENST00000556211 1196 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AP001180.3-201ENST00000582221 145 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC115621.1-201ENST00000604653 858 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AL163642.2-201ENST00000604722 1019 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 OR2BH1P-201ENST00000608850 864 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC099669.2-201ENST00000616549 437 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AL731566.2-201ENST00000618971 317 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC006213.5-201ENST00000619673 288 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC004943.3-201ENST00000624116 600 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AP003072.4-201ENST00000624580 310 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AC024560.2-201ENST00000507981 1497 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RNF6P1-201ENST00000444889 1784 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-98P-201ENST00000384173 107 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 RPL32P23-201ENST00000397237 405 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC136624.1-201ENST00000400791 413 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 RN7SKP156-201ENST00000410308 342 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 RPS7P13-201ENST00000413955 498 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL158050.1-201ENST00000416077 457 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 TCEA1P2-201ENST00000420496 906 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC023128.2-201ENST00000420880 1223 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC092685.1-201ENST00000447960 1243 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 MTND2P8-201ENST00000450555 1025 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC006511.1-201ENST00000470614 315 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC022034.3-201ENST00000471393 478 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-352P-201ENST00000516908 107 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 OSBPL9P3-201ENST00000534523 595 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC104229.1-201ENST00000561364 255 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 MTND4LP25-201ENST00000570218 163 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC107982.3-201ENST00000584957 985 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC093227.2-201ENST00000589357 285 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC067852.4-201ENST00000590314 478 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AL163051.2-201ENST00000618976 735 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 AC116563.2-201ENST00000624751 535 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 DCAF13P3-201ENST00000561147 1334 ntBASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRAPPC4Q9Y296 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms