Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 AL034370.1-201ENST00000397254 1590 ntBASIC5.42□□□□□ -1.54
PPARGC1AQ9UBK2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC011493.1-201ENST00000596753 1632 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RNU6-797P-201ENST00000363101 109 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RN7SKP224-201ENST00000364140 325 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 Y_RNA.372-201ENST00000365599 102 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MTND4LP20-201ENST00000402379 270 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AL078604.1-201ENST00000404609 466 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 GSTA9P-201ENST00000406231 611 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC009965.2-201ENST00000425328 970 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RPL37P1-201ENST00000432310 284 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RPS20P1-201ENST00000434853 354 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RPL12P46-201ENST00000436610 195 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 HMGB1P31-201ENST00000437242 427 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MTND6P13-201ENST00000443510 523 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AL163193.1-201ENST00000444895 788 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 HIGD1AP8-201ENST00000453927 274 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MTCO3P2-201ENST00000457365 171 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC018638.3-201ENST00000461273 132 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RN7SL814P-201ENST00000487715 300 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC016559.2-201ENST00000510759 359 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 RNA5SP34-201ENST00000516887 130 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC012400.1-201ENST00000518452 381 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AP003467.2-201ENST00000520175 319 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC090515.3-201ENST00000560431 315 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AL391840.1-201ENST00000571144 367 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 NRBF2P1-201ENST00000587407 859 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AP002360.3-201ENST00000607673 710 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC126915.2-201ENST00000610957 190 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC006338.1-201ENST00000618453 749 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MIR6839-201ENST00000620425 113 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC006210.2-201ENST00000367074 1545 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AL451142.2-201ENST00000429076 2090 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 AC005332.5-201ENST00000591222 2919 ntBASIC5.41□□□□□ -1.54
PPARGC1AQ9UBK2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC117529.2-201ENST00000512159 2068 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 SNORA17.1-201ENST00000362945 126 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RNY4P14-201ENST00000363656 96 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RNA5SP90-201ENST00000364801 99 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RNU6-171P-201ENST00000384354 107 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 MIR589-201ENST00000385238 99 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RPL21P67-201ENST00000402896 478 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 FCF1P10-201ENST00000407590 479 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AL133384.1-201ENST00000412744 351 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 BX510359.3-201ENST00000422168 306 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 MTND4P28-201ENST00000426217 387 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 NANOGP6-201ENST00000429190 847 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms