Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LINC00622-201ENST00000562811 1570 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 MTND6P33-201ENST00000571794 183 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AL158063.1-201ENST00000615349 536 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC025588.4-201ENST00000615802 908 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AL158196.1-201ENST00000616786 434 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AL161637.1-201ENST00000622380 412 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.59□□□□□ -1.68
EBF3Q9H4W6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.59□□□□□ -1.68
EBF3Q9H4W6 MAPK10-320ENST00000641462 6696 ntBASIC4.59□□□□□ -1.68
EBF3Q9H4W6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AL592182.3-201ENST00000642132 3304 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 SGO1P2-201ENST00000429458 1589 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RNA5SP52-201ENST00000362448 134 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RNA5SP388-201ENST00000362584 119 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RNU6-867P-201ENST00000364956 107 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RNU6-1283P-201ENST00000365314 105 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RNU6-1215P-201ENST00000384441 102 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 SNORA37-201ENST00000384504 129 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 Y_RNA.553-201ENST00000384670 102 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RPS27AP11-201ENST00000402798 447 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RPL23AP38-201ENST00000423801 469 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 RPL23AP4-201ENST00000427757 463 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC244035.1-201ENST00000430042 390 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC122718.1-201ENST00000439448 744 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC239367.2-201ENST00000447309 705 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 CDC42P1-201ENST00000456658 548 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 FAM133DP-201ENST00000464802 691 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 NDUFB4P12-201ENST00000513465 390 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC022447.1-201ENST00000515358 464 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 MIR2116-201ENST00000517221 80 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 IGLV3-26-201ENST00000520756 302 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC109635.6-201ENST00000525487 1113 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 TRAV8-5-201ENST00000537369 341 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 ELOCP32-201ENST00000548625 324 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC090515.3-201ENST00000560431 315 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC074050.1-201ENST00000563247 211 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC027104.1-201ENST00000563702 681 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC122134.1-201ENST00000565664 1104 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 ATP5F1P7-201ENST00000567330 760 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC008759.1-201ENST00000589783 983 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 uc_338.13-201ENST00000618243 179 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 AC119674.1-212ENST00000641155 993 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 SEC63P2-201ENST00000503863 1939 ntBASIC4.58□□□□□ -1.68
EBF3Q9H4W6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
EBF3Q9H4W6 CR381670.1-201ENST00000624291 1693 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC006971.1-201ENST00000407916 4486 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 MIR383-201ENST00000362257 73 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 RNU6-353P-201ENST00000364266 108 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 VTA1P1-201ENST00000414044 866 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AL139095.3-201ENST00000419672 1203 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 RPL21P43-201ENST00000425440 472 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 MTCO1P52-201ENST00000433928 531 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 OR4C10P-201ENST00000434991 931 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC069285.2-201ENST00000440210 275 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC002542.1-201ENST00000440683 193 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms