Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 Y_RNA.801-201ENST00000619005 101 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC022509.4-201ENST00000621404 572 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 DCAF13P3-201ENST00000561147 1334 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS11Q9H270 RNA5SP391-201ENST00000363456 119 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 RN7SKP292-201ENST00000365522 317 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 RNU6-1227P-201ENST00000383981 107 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 SNORD116-23-201ENST00000384645 92 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AC013442.1-201ENST00000397347 228 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 AL390316.1-201ENST00000406279 553 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 FAT1P1-201ENST00000406588 507 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 SNORA11.3-201ENST00000408471 128 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 RN7SKP286-201ENST00000410894 299 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS11Q9H270 RPL36AP10-201ENST00000421785 322 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS11Q9H270 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS11Q9H270 SEPT7P5-201ENST00000434048 306 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 AC064862.4-201ENST00000442180 334 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS11Q9H270 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS11Q9H270 OR6K1P-201ENST00000456766 971 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS11Q9H270 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS11Q9H270 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 IGHV3-32-201ENST00000519182 355 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 FAM92A1P1-201ENST00000528023 890 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS11Q9H270 AL442663.2-201ENST00000554385 511 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 GTF2IP22-201ENST00000554443 182 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS11Q9H270 OR4K7P-201ENST00000580232 945 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 MIR1273E-201ENST00000581165 102 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 MIR548AB-201ENST00000584917 84 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS11Q9H270 AC008814.1-201ENST00000603797 406 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 BNIP3P11-201ENST00000603878 563 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AP000894.4-201ENST00000610185 483 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 AC023158.2-201ENST00000614876 543 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 SNORA11.6-201ENST00000619030 128 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 MIR1910-201ENST00000636955 80 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 LINC01739-205ENST00000641890 573 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 AP000542.2-201ENST00000623199 6179 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 Z99496.1-201ENST00000469424 1477 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS11Q9H270 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VPS11Q9H270 SCARNA15-201ENST00000607520 4325 ntBASIC5.18□□□□□ -1.58
VPS11Q9H270 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
VPS11Q9H270 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS11Q9H270 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
VPS11Q9H270 ASNSP1-201ENST00000518311 1939 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS11Q9H270 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 AL079343.1-201ENST00000572358 1771 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS11Q9H270 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
VPS11Q9H270 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
VPS11Q9H270 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS11Q9H270 Y_RNA.9-201ENST00000362354 101 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 RNU6-582P-201ENST00000362989 107 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 RNA5SP335-201ENST00000363817 110 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 RNA5SP234-201ENST00000363916 119 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 RNA5SP510-201ENST00000364697 99 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 Y_RNA.295-201ENST00000364918 102 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 Y_RNA.372-201ENST00000365599 102 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 RPL31P1-201ENST00000398116 372 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 RNA5SP80-201ENST00000410475 111 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC013429.2-201ENST00000418798 781 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 LINC00993-201ENST00000420453 540 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 MTND2P23-201ENST00000422990 651 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms