Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC108078.1-201ENST00000508073 725 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC016559.2-201ENST00000510759 359 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 Y_RNA.672-201ENST00000516289 104 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 RNU6-314P-201ENST00000516574 104 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 IGKV2-18-201ENST00000522607 343 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 IGLV3-30-201ENST00000524362 298 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AP003181.2-201ENST00000528941 181 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 LSM3P2-201ENST00000551246 273 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC124947.2-202ENST00000552735 133 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 MIR1273E-201ENST00000581165 102 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 RNU6-87P-201ENST00000607561 108 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC037198.3-201ENST00000616754 526 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AC009159.1-201ENST00000618386 642 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 CR381653.2-201ENST00000624041 768 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AL691477.1-201ENST00000624398 162 ntBASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM55Q9BYV6 MUC2-202ENST00000613187 4845 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL672167.1-205ENST00000641112 3080 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 RNA5SP46-201ENST00000362370 120 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 Y_RNA.296-201ENST00000364930 108 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 RNU6-339P-201ENST00000384310 107 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 SNORD56.6-201ENST00000384569 71 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 GLULP6-201ENST00000399502 913 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 PPIAP9-201ENST00000403866 498 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 MRPL53P1-201ENST00000414323 319 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 USP9YP36-201ENST00000424581 829 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ISCA1P6-201ENST00000427740 390 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL358934.1-201ENST00000432346 324 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC093166.4-201ENST00000457867 318 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 RPS4XP10-201ENST00000465034 731 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 RPS23P6-201ENST00000466136 431 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 NENFP3-201ENST00000503735 313 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC002456.2-201ENST00000509356 380 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 HMGN2P36-201ENST00000529541 409 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL161713.1-201ENST00000555538 145 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL391840.1-201ENST00000571144 367 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 NRBF2P1-201ENST00000587407 859 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 DUXAP4-201ENST00000603046 613 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL158209.2-201ENST00000619266 216 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC073534.2-201ENST00000620377 381 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC068880.5-201ENST00000624331 290 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL157786.1-207ENST00000627771 695 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC010149.2-201ENST00000637608 315 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AL034549.2-201ENST00000618285 3373 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 AC093849.1-201ENST00000563631 2209 ntBASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM55Q9BYV6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TRIM55Q9BYV6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms