Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR494-201ENST00000349529 81 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-776P-201ENST00000364403 104 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RNA5SP433-201ENST00000364491 114 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.292-201ENST00000364904 97 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-1022P-201ENST00000365049 104 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RN7SKP269-201ENST00000365545 319 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR421-201ENST00000365696 85 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MRPS6P2-201ENST00000381143 370 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SNORA51.11-201ENST00000384442 131 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SNORA20-201ENST00000384662 132 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 U8.14-201ENST00000390843 143 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SNORD72-201ENST00000390994 80 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MTND4LP19-201ENST00000403051 166 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU2-9P-201ENST00000410194 145 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RAB9AP3-201ENST00000412737 573 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL450992.3-201ENST00000413192 568 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 PRELID3BP11-201ENST00000414230 479 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ATP5A1P8-201ENST00000423669 1291 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 OR5AW1P-201ENST00000426334 1006 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC005019.1-201ENST00000436455 431 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL7P28-201ENST00000437739 740 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL23AP16-201ENST00000441715 421 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL592437.1-201ENST00000443781 492 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC097463.1-201ENST00000447288 481 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RAB9AP1-201ENST00000449393 573 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL356010.1-201ENST00000456364 102 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AP002345.1-201ENST00000456493 928 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL7P22-201ENST00000466005 733 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL21P99-201ENST00000480369 423 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL163973.1-201ENST00000484753 577 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL12P30-201ENST00000488389 499 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL7P38-201ENST00000488396 739 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC091965.3-201ENST00000506236 208 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC006445.2-201ENST00000510061 472 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 SNORA25.12-201ENST00000516202 82 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RN7SKP238-201ENST00000516483 249 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 snoZ278.1-201ENST00000517059 112 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RNA5SP340-201ENST00000517132 107 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MYL12AP1-201ENST00000518490 515 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 IGHV3-57-201ENST00000520143 280 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 PMS2P3-207ENST00000529061 717 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AP000662.1-201ENST00000530952 487 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC103968.1-201ENST00000557841 573 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR4271-201ENST00000582451 67 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008521.1-201ENST00000587471 187 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 FAM60CP-201ENST00000591086 664 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 OR7A11P-201ENST00000597719 953 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC068790.3-201ENST00000602988 553 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC104662.1-201ENST00000604448 511 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 uc_338.28-201ENST00000612082 187 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 AC084757.4-201ENST00000616350 526 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR6861-201ENST00000618657 64 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR4662A-201ENST00000637499 67 ntBASIC2.18□□□□□ -2.06
KRTAP4-3Q9BYR4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms