Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.53□□□□□ -1.68
USP47Q96K76 RNU1-143P-201ENST00000516296 146 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.53□□□□□ -1.68
USP47Q96K76 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.53□□□□□ -1.68
USP47Q96K76 AC124856.1-201ENST00000600819 896 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 U1.23-201ENST00000610293 146 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 RNU1-68P-201ENST00000615382 146 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 U1.39-201ENST00000621562 146 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 AC026422.1-201ENST00000623961 452 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.53□□□□□ -1.68
USP47Q96K76 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP47Q96K76 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP47Q96K76 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.53□□□□□ -1.68
USP47Q96K76 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.53□□□□□ -1.68
USP47Q96K76 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP47Q96K76 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
USP47Q96K76 AC093719.1-202ENST00000392735 373 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 CST9LP2-201ENST00000437612 320 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 FTH1P25-201ENST00000447665 469 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.53□□□□□ -1.69
USP47Q96K76 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.53□□□□□ -1.69
USP47Q96K76 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
USP47Q96K76 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
USP47Q96K76 Vault.1-201ENST00000516474 102 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.53□□□□□ -1.69
USP47Q96K76 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.53□□□□□ -1.69
USP47Q96K76 LARP7P3-201ENST00000579888 337 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 AC008507.1-201ENST00000587506 734 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 AL592295.2-201ENST00000612578 206 ntBASIC4.53□□□□□ -1.69
USP47Q96K76 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.53□□□□□ -1.69
USP47Q96K76 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
USP47Q96K76 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.52□□□□□ -1.69
USP47Q96K76 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.52□□□□□ -1.69
USP47Q96K76 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP47Q96K76 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.52□□□□□ -1.69
USP47Q96K76 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
USP47Q96K76 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
USP47Q96K76 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.52□□□□□ -1.69
USP47Q96K76 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.52□□□□□ -1.69
USP47Q96K76 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.52□□□□□ -1.69
USP47Q96K76 RN7SL863P-201ENST00000462370 296 ntBASIC4.52□□□□□ -1.69
USP47Q96K76 TMED11P-201ENST00000479478 690 ntBASIC4.52□□□□□ -1.69
USP47Q96K76 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.52□□□□□ -1.69
USP47Q96K76 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USP47Q96K76 ADAM3B-201ENST00000569937 840 ntBASIC4.52□□□□□ -1.69
USP47Q96K76 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.52□□□□□ -1.69
USP47Q96K76 AL162274.2-201ENST00000614406 332 ntBASIC4.52□□□□□ -1.69
USP47Q96K76 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.51□□□□□ -1.69
USP47Q96K76 AC093775.1-201ENST00000624154 1868 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP47Q96K76 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP47Q96K76 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP47Q96K76 AC018529.3-201ENST00000624212 2254 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.51□□□□□ -1.69
USP47Q96K76 AC119744.1-201ENST00000454746 1715 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP47Q96K76 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
USP47Q96K76 OR10J6P-201ENST00000289731 930 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.51□□□□□ -1.69
USP47Q96K76 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP47Q96K76 RNF19BPX-201ENST00000426224 625 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.51□□□□□ -1.69
USP47Q96K76 AC006028.1-201ENST00000438379 402 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 ISCA1P2-201ENST00000438679 421 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AC069540.1-201ENST00000446320 988 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 HMGN1P18-201ENST00000457642 277 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AC006445.1-201ENST00000491925 405 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.51□□□□□ -1.69
USP47Q96K76 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.51□□□□□ -1.69
USP47Q96K76 GMCL1P2-201ENST00000605230 823 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AL365400.2-201ENST00000605604 902 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AL592494.3-201ENST00000609485 464 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AC006386.2-201ENST00000624491 75 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 AC012005.1-201ENST00000624575 75 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP47Q96K76 MTND4P10-201ENST00000446199 1363 ntBASIC4.51□□□□□ -1.69
USP47Q96K76 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.51□□□□□ -1.69
USP47Q96K76 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP47Q96K76 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP47Q96K76 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
USP47Q96K76 AL138878.1-201ENST00000405131 347 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.5□□□□□ -1.69
USP47Q96K76 AC013470.3-201ENST00000420252 1194 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.5□□□□□ -1.69
USP47Q96K76 RSL24D1P3-201ENST00000449255 495 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 S100A11P2-201ENST00000467589 312 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 RPL27AP5-201ENST00000469428 449 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 AC087312.1-201ENST00000471411 480 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 MTCO3P42-201ENST00000509488 518 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.5□□□□□ -1.69
USP47Q96K76 MTCO3P39-201ENST00000514812 518 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.5□□□□□ -1.69
USP47Q96K76 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms