Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 TPMTP3-201ENST00000411928 735 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC245028.1-201ENST00000423259 256 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 EIF4HP2-201ENST00000424380 563 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL360081.1-201ENST00000428299 555 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 NMNAT1P2-201ENST00000435192 860 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 Z80107.2-201ENST00000445127 392 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 IGHV5-78-201ENST00000450948 295 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL121877.1-201ENST00000453704 622 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 OR52A4P-201ENST00000472867 958 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC072039.1-201ENST00000477611 581 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC007686.1-201ENST00000488511 463 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 OR4G11P-201ENST00000492842 939 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC083829.1-201ENST00000503756 657 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 DSTNP2-201ENST00000504533 515 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 MTCO1P30-201ENST00000515244 580 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 RNA5SP497-201ENST00000516081 97 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AP003033.1-201ENST00000527244 415 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 HIGD1AP10-201ENST00000527837 282 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 OR7K1P-201ENST00000546439 926 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC009117.1-201ENST00000563948 554 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL512347.1-201ENST00000566420 503 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 MIR4270-201ENST00000581799 70 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 MIR4737-201ENST00000583979 81 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC017100.2-201ENST00000584628 355 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 RSL24D1P11-201ENST00000591045 491 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC091946.2-201ENST00000606105 291 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL391497.1-201ENST00000608671 547 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC008443.7-201ENST00000622195 246 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 CR381572.2-201ENST00000624852 397 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC026634.1-201ENST00000634369 198 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 AC009951.1-201ENST00000623674 2614 ntBASIC4.68□□□□□ -1.66
VPS50Q96JG6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS50Q96JG6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 SNORA73.1-201ENST00000363107 205 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 RNU6-623P-201ENST00000363143 105 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 Y_RNA.194-201ENST00000363985 102 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 MTCO3P31-201ENST00000405526 789 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 MIR1284-201ENST00000408337 120 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 MTCYBP39-201ENST00000437562 491 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 RPS29P9-201ENST00000440360 171 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 RPL34P20-201ENST00000442771 351 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 RPL7P31-201ENST00000450192 724 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 OR52J1P-201ENST00000450596 932 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 RPL23AP35-201ENST00000451906 501 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 KATNBL1P6-201ENST00000453433 915 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 ZNF114P1-201ENST00000453500 292 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 MTCYBP17-201ENST00000503579 789 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC002456.2-201ENST00000509356 380 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 MTCO3P7-201ENST00000510008 774 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 OR51K1P-201ENST00000510214 950 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC110775.1-201ENST00000513721 462 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 SLC2A13P1-201ENST00000531560 322 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms