Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 WISP1-OT1-201ENST00000602893 642 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL137072.1-201ENST00000603444 466 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AP002360.3-201ENST00000607673 710 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC008443.7-201ENST00000622195 246 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC116563.2-201ENST00000624751 535 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 ZNF137P-201ENST00000456718 1920 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 NXPH1-205ENST00000602349 1953 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC007390.2-201ENST00000606229 3803 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC011477.1-204ENST00000623416 1325 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AC046144.1-201ENST00000478559 1853 ntBASIC4.18□□□□□ -1.74
CLIP4Q8N3C7 AL031985.3-201ENST00000565390 2449 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RNU4-75P-201ENST00000364621 146 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RNU1-63P-201ENST00000383902 164 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RNU6-253P-201ENST00000384730 105 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MTCO3P41-201ENST00000414801 328 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RAC1P3-201ENST00000416129 580 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 NPM1P11-201ENST00000417106 855 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RAD23BP1-201ENST00000421404 1227 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL590762.4-201ENST00000425885 253 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 IPMKP1-201ENST00000425988 855 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC073069.1-201ENST00000428657 441 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RPL7P4-203ENST00000430239 730 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL050321.1-201ENST00000432363 400 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL590103.1-201ENST00000434488 307 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL353706.1-201ENST00000436728 494 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MTND6P18-201ENST00000439477 513 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RPL23AP65-201ENST00000475608 468 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC011005.3-201ENST00000491624 395 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC010424.1-201ENST00000506336 297 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 RNA5SP497-201ENST00000516081 97 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 PCNPP1-201ENST00000552501 511 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC007954.1-201ENST00000554198 494 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL391156.1-201ENST00000554965 554 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC011260.1-201ENST00000578420 472 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC013244.1-201ENST00000604279 193 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC018714.1-201ENST00000605028 208 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AP000254.1-201ENST00000609934 520 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC245297.2-201ENST00000610119 565 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AL136981.2-201ENST00000617319 734 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AC016717.3-201ENST00000624730 554 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP4Q8N3C7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC092104.1-201ENST00000497346 1441 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC073429.2-201ENST00000569694 1444 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC067945.1-201ENST00000342609 618 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 RNU6-1300P-201ENST00000391046 108 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 SNORA26.8-201ENST00000391306 124 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL161909.1-201ENST00000397390 712 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL121978.1-201ENST00000402778 359 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 TPT1P2-201ENST00000413105 503 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms