Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC008837.2-201ENST00000513076 418 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 ELOCP32-201ENST00000548625 324 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 LSM6P2-201ENST00000552208 177 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC135628.1-201ENST00000568867 534 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC092140.2-201ENST00000618027 521 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AF001550.2-201ENST00000636643 217 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 ZFRP1-201ENST00000457579 2970 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AL122126.1-201ENST00000546905 1318 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 SGO1P2-201ENST00000429458 1589 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AL136164.3-201ENST00000624429 3978 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 RNU6-1226P-201ENST00000384317 107 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 RNU6-921P-201ENST00000384361 107 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 MIR217-201ENST00000384817 110 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 MIR649-201ENST00000384843 97 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 RNU6-1300P-201ENST00000391046 108 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 MIR921-201ENST00000401133 56 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 RPS3AP9-201ENST00000417027 792 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 BOLA3P4-201ENST00000418151 400 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC007435.1-201ENST00000421086 415 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 MTCO3P1-205ENST00000422088 832 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 GTF2IP23-201ENST00000423746 351 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 CENPIP1-201ENST00000425713 902 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AL593851.1-201ENST00000426171 157 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 B3GNT2P1-201ENST00000434960 952 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 USP9YP7-201ENST00000436723 430 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 UBE2D3P4-201ENST00000441973 436 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 USP9YP32-201ENST00000452432 430 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AL513533.1-201ENST00000453728 415 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC133473.1-201ENST00000455173 299 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC010301.1-201ENST00000473936 355 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 DEFB109F-201ENST00000491870 277 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC116353.3-201ENST00000511215 249 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC007016.1-201ENST00000512110 244 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 RNA5SP446-201ENST00000515955 82 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AP001189.2-201ENST00000527320 189 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AP000619.3-201ENST00000535634 1127 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC105129.1-201ENST00000560250 297 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC002400.1-201ENST00000569310 726 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC004825.2-201ENST00000616634 455 ntBASIC5.25□□□□□ -1.57
LONRF3Q496Y0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
LONRF3Q496Y0 AC021755.1-201ENST00000559747 1447 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 MAPK10-263ENST00000641052 4307 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LONRF3Q496Y0 RPL32P3-201ENST00000359025 275 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 RNA5SP151-201ENST00000365632 117 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LONRF3Q496Y0 SNORD116-9-201ENST00000384000 95 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 SNORD116-3-201ENST00000384287 95 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 SNORD116-7-201ENST00000384404 95 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 SNORD116-5-201ENST00000384462 95 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LONRF3Q496Y0 RPL23AP48-201ENST00000406913 488 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.24□□□□□ -1.57
LONRF3Q496Y0 AL591848.1-201ENST00000413092 322 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 P2RY10P2-201ENST00000416730 913 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 SEPT2P1-201ENST00000419651 180 ntBASIC5.24□□□□□ -1.57
LONRF3Q496Y0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.24□□□□□ -1.57
LONRF3Q496Y0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms