Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RN7SL132P-201ENST00000478131 296 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC011037.1-201ENST00000483964 558 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC090013.1-201ENST00000485147 480 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC011352.3-201ENST00000505162 593 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 PGBD4P4-201ENST00000509673 613 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC006499.6-201ENST00000511169 607 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 OR4C2P-201ENST00000530855 1064 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AL392048.1-201ENST00000613946 534 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC009318.3-201ENST00000616916 503 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 MIR4727-201ENST00000622232 55 ntBASIC4.47□□□□□ -1.69
USP41Q3LFD5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP41Q3LFD5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP41Q3LFD5 AL122126.1-201ENST00000546905 1318 ntBASIC4.46□□□□□ -1.69
USP41Q3LFD5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
USP41Q3LFD5 AC114546.3-201ENST00000623582 1734 ntBASIC4.46□□□□□ -1.69
USP41Q3LFD5 ASNSP1-201ENST00000518311 1939 ntBASIC4.46□□□□□ -1.69
USP41Q3LFD5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC016716.1-201ENST00000265882 708 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 RNU4-92P-201ENST00000363783 136 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 SNORD74.4-201ENST00000364129 80 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 RPL22P18-201ENST00000417197 377 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC004552.1-201ENST00000419089 348 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 RBMY1KP-201ENST00000423480 476 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 OR8F1P-201ENST00000425243 930 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 RPL37P1-201ENST00000432310 284 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 GEMIN8P3-201ENST00000445417 720 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 RPL23AP15-201ENST00000450202 459 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC079804.1-201ENST00000461922 436 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 RPS26P3-201ENST00000470205 348 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC090543.2-201ENST00000483963 348 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC004057.1-201ENST00000485827 348 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC114322.1-201ENST00000506771 926 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC010460.1-201ENST00000507087 466 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 FTH1P21-201ENST00000512179 511 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AF279873.1-201ENST00000523393 313 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC022655.2-201ENST00000577280 318 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 NF1P5-201ENST00000588287 448 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 GAS5-AS1-201ENST00000602767 694 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC009464.1-201ENST00000615731 469 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 RMST_9.1-201ENST00000619945 193 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 CYP1D1P-201ENST00000416662 1433 ntBASIC4.46□□□□□ -1.7
USP41Q3LFD5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
USP41Q3LFD5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP41Q3LFD5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USP41Q3LFD5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.45□□□□□ -1.7
USP41Q3LFD5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP41Q3LFD5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USP41Q3LFD5 AP005901.5-201ENST00000545779 1796 ntBASIC4.45□□□□□ -1.7
USP41Q3LFD5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP41Q3LFD5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.45□□□□□ -1.7
USP41Q3LFD5 HMGB1P5-201ENST00000255320 642 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms