Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL12P48061 RPL21P71-201ENST00000465598 459 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL12P48061 AC092045.1-201ENST00000495716 1231 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL12P48061 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL12P48061 AC021678.1-201ENST00000505195 936 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL12P48061 APOOP4-201ENST00000513530 597 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 OR4R3P-201ENST00000525084 838 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 RFPL1S-203ENST00000539579 330 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL12P48061 AC074029.2-201ENST00000551045 634 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL12P48061 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL12P48061 AP005205.1-201ENST00000563503 508 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AC084373.1-201ENST00000603311 235 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AL162713.1-201ENST00000604480 262 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AC124312.4-201ENST00000605533 310 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 AL590240.3-201ENST00000621416 943 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 AC114546.3-201ENST00000623582 1734 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL12P48061 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL12P48061 AL445437.1-201ENST00000623157 3087 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CXCL12P48061 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.42□□□□□ -1.86
CXCL12P48061 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CXCL12P48061 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL12P48061 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL12P48061 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CXCL12P48061 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 RSL24D1P1-201ENST00000404972 493 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AL138885.1-201ENST00000405921 675 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AL034374.1-201ENST00000406329 351 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 VN1R51P-201ENST00000411675 945 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 MRPS33P4-201ENST00000434892 317 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 NANOGNBP1-201ENST00000448444 480 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.42□□□□□ -1.86
CXCL12P48061 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC097462.2-201ENST00000504623 481 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 FABP5P6-201ENST00000510588 409 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AC034244.2-201ENST00000514668 858 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL12P48061 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CXCL12P48061 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL12P48061 OR8X1P-201ENST00000534542 869 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC084036.1-201ENST00000609190 508 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC026422.1-201ENST00000623961 452 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 AC104820.1-201ENST00000624183 307 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL12P48061 AC119674.1-212ENST00000641155 993 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL12P48061 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CXCL12P48061 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL12P48061 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.42□□□□□ -1.86
CXCL12P48061 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 TNPO1P3-201ENST00000436471 2662 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL12P48061 ANKRD36P1-201ENST00000344424 659 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 GSTA12P-201ENST00000402398 508 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL12P48061 AC008065.1-201ENST00000428525 348 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.41□□□□□ -1.86
CXCL12P48061 MTND2P2-201ENST00000434633 945 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL12P48061 AL353898.1-201ENST00000444055 238 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 MTND3P4-201ENST00000453537 303 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AP002345.1-201ENST00000456493 928 ntBASIC3.41□□□□□ -1.86
CXCL12P48061 AC106872.2-201ENST00000494303 480 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 832.9 ms