Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN9P43378 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN9P43378 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN9P43378 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN9P43378 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN9P43378 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN9P43378 HSPD1P16-201ENST00000402302 394 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 PRELID3BP11-201ENST00000414230 479 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC008280.1-201ENST00000418851 412 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 MTND2P18-201ENST00000419962 1030 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN9P43378 AL732292.1-201ENST00000426692 226 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 IFNNP1-201ENST00000429219 553 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC068287.1-201ENST00000430283 295 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 RPS29P17-201ENST00000430795 166 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 PRELID3BP10-201ENST00000431957 584 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AL050321.1-201ENST00000432363 400 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC023347.2-201ENST00000433994 462 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 B3GNT2P1-201ENST00000434960 952 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AL357520.1-201ENST00000441557 453 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AL512326.1-201ENST00000443050 721 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 GEMIN8P3-201ENST00000445417 720 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 RPL23AP15-201ENST00000450202 459 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 ART2BP-201ENST00000453501 499 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 RPS15AP1-201ENST00000457423 391 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN9P43378 RPL7P22-201ENST00000466005 733 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC010307.1-201ENST00000467206 836 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 RPS26P28-201ENST00000470806 348 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 RPL7P18-201ENST00000478965 734 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC104164.2-201ENST00000496953 495 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC011352.3-201ENST00000505162 593 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 OR5H4P-201ENST00000510851 923 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 KRT19P6-201ENST00000510983 209 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 SOD1P3-201ENST00000518682 454 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC027309.2-201ENST00000520566 192 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 IGLV3-26-201ENST00000520756 302 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 TRAV8-5-201ENST00000537369 341 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC006064.5-201ENST00000541782 248 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC090515.3-201ENST00000560431 315 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC124068.1-201ENST00000563131 678 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC109446.2-201ENST00000567872 497 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN9P43378 AC013444.2-201ENST00000603317 787 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC119501.1-201ENST00000603646 475 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 AC008745.1-201ENST00000604064 271 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN9P43378 AC068620.4-201ENST00000636730 1182 ntBASIC4.5□□□□□ -1.69
PTPN9P43378 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN9P43378 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN9P43378 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN9P43378 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
PTPN9P43378 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN9P43378 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTPN9P43378 RNU6-492P-201ENST00000363035 104 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 RNU5D-1-201ENST00000363299 116 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTPN9P43378 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PTPN9P43378 AL583835.1-201ENST00000399570 407 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AL161449.1-201ENST00000414531 1199 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AL157831.1-201ENST00000426134 473 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AL513175.1-201ENST00000431492 780 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 CEACAMP1-201ENST00000434624 1035 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 AC079804.1-201ENST00000461922 436 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 CCDC75P1-201ENST00000469247 791 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN9P43378 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN9P43378 AC010587.2-201ENST00000511727 448 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 RNA5SP73-201ENST00000516744 108 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN9P43378 AC091515.1-201ENST00000548110 679 ntBASIC4.49□□□□□ -1.69
PTPN9P43378 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN9P43378 MIR4716-201ENST00000579628 84 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms