Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.13□□□□□ -1.75
HNF4AP41235 AC068722.2-201ENST00000618734 544 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 MIR7702-201ENST00000621931 59 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AL078595.3-201ENST00000623815 1166 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 MIR7641-1-201ENST00000627518 61 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.13□□□□□ -1.75
HNF4AP41235 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 USP8P1-201ENST00000494673 3183 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HNF4AP41235 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.12□□□□□ -1.75
HNF4AP41235 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HNF4AP41235 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HNF4AP41235 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.12□□□□□ -1.75
HNF4AP41235 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HNF4AP41235 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HNF4AP41235 SNORA51.2-201ENST00000364595 132 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 RNU6-837P-201ENST00000391056 108 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 MTCO2P31-201ENST00000402702 684 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 HSPE1P26-201ENST00000405341 275 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.12□□□□□ -1.75
HNF4AP41235 RNA5SP36-201ENST00000410197 133 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 RPS3AP25-201ENST00000411660 793 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC016397.1-201ENST00000412463 242 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC011933.1-201ENST00000413334 321 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 LIPT1P1-201ENST00000415870 1186 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 MFSD13B-201ENST00000420133 1290 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 PTP4A1P5-201ENST00000420305 455 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 OFD1P18Y-201ENST00000420889 959 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 AL513174.1-201ENST00000423182 629 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AL157831.1-201ENST00000426134 473 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.12□□□□□ -1.75
HNF4AP41235 B3GNT2P1-201ENST00000434960 952 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.12□□□□□ -1.75
HNF4AP41235 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.12□□□□□ -1.75
HNF4AP41235 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 DUXAP8-207ENST00000456786 622 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC116533.1-201ENST00000459748 321 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC139783.2-201ENST00000504847 1145 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC025674.1-201ENST00000507074 324 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 PARP4P3-201ENST00000510265 317 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 NDUFB4P9-201ENST00000511646 388 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 IGKV2D-36-201ENST00000518643 226 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC008802.1-201ENST00000519121 791 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AP003385.6-201ENST00000531603 374 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HNF4AP41235 TVP23BP1-201ENST00000557500 617 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.12□□□□□ -1.75
HNF4AP41235 AL606834.3-201ENST00000602615 496 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AL020997.3-201ENST00000602843 359 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AL513477.2-201ENST00000607858 568 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 DUXAP10-204ENST00000612052 616 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC103858.2-201ENST00000621471 543 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC048347.1-201ENST00000624621 427 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 AC112200.1-201ENST00000625015 234 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HNF4AP41235 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HNF4AP41235 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HNF4AP41235 AL158163.1-201ENST00000603915 1649 ntBASIC4.12□□□□□ -1.75
HNF4AP41235 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HNF4AP41235 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HNF4AP41235 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.11□□□□□ -1.75
HNF4AP41235 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HNF4AP41235 RNU5E-10P-201ENST00000363506 118 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RNA5SP509-201ENST00000364577 119 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RNU6-468P-201ENST00000384003 109 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 U6.112-201ENST00000384129 70 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RNU6-207P-201ENST00000384137 107 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RNU6-921P-201ENST00000384361 107 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 RNU6-298P-201ENST00000390888 96 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.11□□□□□ -1.75
HNF4AP41235 ELOCP18-201ENST00000434209 337 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AC234064.1-201ENST00000436312 247 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 MTND1P26-201ENST00000440488 538 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 EXTL2P1-201ENST00000446218 416 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.11□□□□□ -1.75
HNF4AP41235 AL034418.1-201ENST00000448675 860 ntBASIC4.11□□□□□ -1.75
HNF4AP41235 AL009048.1-201ENST00000450437 298 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms