Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 AC008638.3-201ENST00000603341 463 ntBASIC4.06□□□□□ -1.76
HLA-DPA1P20036 AC113368.1-201ENST00000603736 382 ntBASIC4.06□□□□□ -1.76
HLA-DPA1P20036 AL390816.3-201ENST00000604527 1066 ntBASIC4.06□□□□□ -1.76
HLA-DPA1P20036 RNU4-89P-201ENST00000607443 133 ntBASIC4.06□□□□□ -1.76
HLA-DPA1P20036 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 ZYXP1-201ENST00000617638 118 ntBASIC4.06□□□□□ -1.76
HLA-DPA1P20036 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 AL121594.5-201ENST00000631724 573 ntBASIC4.06□□□□□ -1.76
HLA-DPA1P20036 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DPA1P20036 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 SNORA7.2-201ENST00000364446 145 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RNA5SP317-201ENST00000410176 116 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RNA5SP311-201ENST00000411290 116 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LIPT1P1-201ENST00000415870 1186 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC004552.1-201ENST00000419089 348 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 OFD1P18Y-201ENST00000420889 959 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 VN1R25P-201ENST00000443385 738 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 VN1R40P-201ENST00000455196 941 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 NF1P3-201ENST00000457709 450 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC010469.1-201ENST00000463864 576 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RPS26P3-201ENST00000470205 348 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC090543.2-201ENST00000483963 348 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RPL31P13-201ENST00000484151 370 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC004057.1-201ENST00000485827 348 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 HMGB1P38-201ENST00000490557 577 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RPL31P61-201ENST00000496160 376 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RNA5SP315-201ENST00000516340 116 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 RNA5SP312-201ENST00000517068 116 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 MTCYBP41-201ENST00000528913 1123 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 OR4A45P-201ENST00000529954 901 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC005412.1-201ENST00000580812 1049 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 OR1AB1P-201ENST00000585564 761 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AP000255.1-201ENST00000610276 676 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 MIR6868-201ENST00000611215 58 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC078880.5-201ENST00000617845 421 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC098679.5-201ENST00000624394 571 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC048347.1-201ENST00000624621 427 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC068724.3-201ENST00000625906 87 ntBASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DPA1P20036 LINC02471-203ENST00000641941 4752 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 CASC19-261ENST00000641853 1638 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RNU6-600P-201ENST00000362524 99 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RNU6-353P-201ENST00000364266 108 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RNA5SP130-201ENST00000364431 114 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RNU6-921P-201ENST00000384361 107 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 MIR649-201ENST00000384843 97 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 GSTA8P-201ENST00000404253 637 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL138880.1-201ENST00000405824 642 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 OR8G2P-201ENST00000412796 908 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RAC1P3-201ENST00000416129 580 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 TAF13P2-201ENST00000416876 286 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 HIGD1AP4-201ENST00000430194 280 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 B3GNT2P1-201ENST00000434960 952 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL096829.2-201ENST00000446582 742 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms