Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 WBP1LP4-201ENST00000505043 344 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 HSPD1P15-201ENST00000505573 1122 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 SNORA70.14-201ENST00000516205 110 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AC004024.1-201ENST00000549244 247 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 RN7SL339P-201ENST00000580597 296 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AL157817.1-201ENST00000614264 790 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AC009318.3-201ENST00000616916 503 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 RMST_5.1-201ENST00000618704 126 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AL713922.2-201ENST00000619384 716 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 MIR23B-201ENST00000384832 97 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 MIR92A2-201ENST00000385299 75 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AL357075.1-201ENST00000404107 726 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 RPS7P13-201ENST00000413955 498 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 LIPT1P1-201ENST00000415870 1186 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC048351.1-201ENST00000420064 602 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 Z75741.1-201ENST00000446793 314 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 CCRL1P1-201ENST00000449542 1053 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 PRSS3P4-201ENST00000453323 162 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 RPL6P9-201ENST00000466502 859 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 SEPT7P6-201ENST00000469999 1143 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 SMARCE1P4-201ENST00000523647 241 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC053481.3-201ENST00000577881 843 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 MIR2682-201ENST00000580305 110 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 CKS1BP3-201ENST00000600888 237 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC083899.3-201ENST00000603413 594 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 AC145207.9-201ENST00000623802 325 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 CFTRP2-201ENST00000634304 199 ntBASIC3.29□□□□□ -1.88
HLA-DQB2P05538 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQB2P05538 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RPL7P26-201ENST00000333817 754 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RNVU1-14-201ENST00000384770 164 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 SKINT1L-201ENST00000401057 817 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RNA5SP44-201ENST00000410446 133 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RNA5SP107-201ENST00000411358 122 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC115115.1-201ENST00000449927 248 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 MTND6P6-201ENST00000478031 263 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RNU6-319P-201ENST00000516025 108 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 MIR92B-201ENST00000607575 96 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms