Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.16□□□□□ -1.74
COL2A1P02458 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
COL2A1P02458 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL2A1P02458 ZNF29P-201ENST00000225587 168 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 RNA5SP42-201ENST00000364278 115 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL2A1P02458 SNORA81-201ENST00000408493 178 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.16□□□□□ -1.74
COL2A1P02458 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AC017083.1-201ENST00000428093 483 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL2A1P02458 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.16□□□□□ -1.74
COL2A1P02458 AL356535.1-201ENST00000440335 398 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AL831737.1-201ENST00000441288 271 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.16□□□□□ -1.74
COL2A1P02458 AC025518.1-201ENST00000479856 347 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 BTF3L4P4-201ENST00000506381 449 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.16□□□□□ -1.74
COL2A1P02458 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 HNRNPKP5-201ENST00000515300 253 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AP006245.1-201ENST00000522549 120 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL2A1P02458 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.16□□□□□ -1.74
COL2A1P02458 DUXAP3-201ENST00000603616 594 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AC015849.6-201ENST00000605454 474 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AL450270.1-201ENST00000606160 391 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 U4.6-201ENST00000621618 127 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 AC119674.1-220ENST00000641502 1048 ntBASIC4.16□□□□□ -1.74
COL2A1P02458 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.16□□□□□ -1.74
COL2A1P02458 AL390862.1-201ENST00000635467 1469 ntBASIC4.15□□□□□ -1.74
COL2A1P02458 AL078595.2-201ENST00000605309 1780 ntBASIC4.15□□□□□ -1.74
COL2A1P02458 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL2A1P02458 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL2A1P02458 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
COL2A1P02458 RNU6-386P-201ENST00000362650 107 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AL121834.1-202ENST00000404494 277 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 MTND5P25-201ENST00000430499 799 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 VN1R108P-201ENST00000431580 830 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 Z85994.2-201ENST00000434327 452 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 NPM1P48-201ENST00000436002 853 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 MTND1P34-201ENST00000438556 671 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.15□□□□□ -1.75
COL2A1P02458 Z83846.1-201ENST00000446798 265 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.15□□□□□ -1.75
COL2A1P02458 AC104164.3-201ENST00000467363 1258 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC104982.1-201ENST00000478775 574 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC012123.2-201ENST00000485809 248 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC069499.1-201ENST00000489433 509 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.15□□□□□ -1.75
COL2A1P02458 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.15□□□□□ -1.75
COL2A1P02458 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.15□□□□□ -1.75
COL2A1P02458 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.15□□□□□ -1.75
COL2A1P02458 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.15□□□□□ -1.75
COL2A1P02458 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.15□□□□□ -1.75
COL2A1P02458 DPRXP4-201ENST00000578053 568 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.15□□□□□ -1.75
COL2A1P02458 NIFKP6-201ENST00000598115 845 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC068620.3-201ENST00000602749 560 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.15□□□□□ -1.75
COL2A1P02458 AC245008.1-201ENST00000608123 476 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AC005156.1-201ENST00000613371 573 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.15□□□□□ -1.75
COL2A1P02458 AC013470.4-201ENST00000619978 986 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.15□□□□□ -1.75
COL2A1P02458 AC097372.4-201ENST00000625025 466 ntBASIC4.15□□□□□ -1.75
COL2A1P02458 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.15□□□□□ -1.75
COL2A1P02458 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL2A1P02458 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.15□□□□□ -1.75
COL2A1P02458 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
COL2A1P02458 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL2A1P02458 TAS2R15P-201ENST00000390674 928 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.14□□□□□ -1.75
COL2A1P02458 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.14□□□□□ -1.75
COL2A1P02458 MTND4LP13-201ENST00000425022 298 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 THAP5P1-201ENST00000439089 262 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.14□□□□□ -1.75
COL2A1P02458 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.14□□□□□ -1.75
COL2A1P02458 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.14□□□□□ -1.75
COL2A1P02458 AC073522.1-201ENST00000483312 377 ntBASIC4.14□□□□□ -1.75
COL2A1P02458 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.14□□□□□ -1.75
COL2A1P02458 AC105313.1-201ENST00000509121 353 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms