Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXA2O43364 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXA2O43364 RNU6-562P-201ENST00000362731 107 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 SNORD115-7-201ENST00000365306 82 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 RNU6-1062P-201ENST00000383908 107 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 Y_RNA.447-201ENST00000384184 113 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 Y_RNA.493-201ENST00000384422 102 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 MIR450B-201ENST00000401182 78 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AL136372.1-201ENST00000403060 228 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AL023284.3-201ENST00000407767 334 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 GSTM3P2-201ENST00000412746 530 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXA2O43364 AL713922.1-201ENST00000416477 747 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 DPPA2P2-201ENST00000418220 897 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXA2O43364 E2F6P2-201ENST00000420708 748 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC130360.1-201ENST00000425489 1117 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC092651.1-201ENST00000426110 312 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXA2O43364 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXA2O43364 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 RN7SL809P-201ENST00000482040 297 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.87□□□□□ -1.31
HOXA2O43364 SNORD116.3-201ENST00000517176 78 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 IGKV1D-22-201ENST00000518953 324 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 TRIM77BP-201ENST00000524985 1119 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC130365.2-201ENST00000525882 1201 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.87□□□□□ -1.31
HOXA2O43364 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXA2O43364 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXA2O43364 RN7SL753P-201ENST00000581238 290 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 RN7SL475P-201ENST00000583379 298 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC005332.4-201ENST00000592752 579 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AP001823.1-201ENST00000604056 1003 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AL049794.2-201ENST00000616301 365 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.87□□□□□ -1.31
HOXA2O43364 AC011755.1-201ENST00000623763 2049 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXA2O43364 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXA2O43364 AC027088.4-201ENST00000611559 1947 ntBASIC6.87□□□□□ -1.31
HOXA2O43364 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXA2O43364 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HOXA2O43364 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HOXA2O43364 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HOXA2O43364 AL606537.1-201ENST00000607258 2011 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 RBPJP2-201ENST00000618187 1444 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 RNU6-874P-201ENST00000362390 105 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 RNA5SP346-201ENST00000363541 121 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 Y_RNA.152-201ENST00000363578 100 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXA2O43364 COX6CP15-201ENST00000426313 211 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 PPIAP7-201ENST00000454070 489 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AL133244.1-201ENST00000456007 258 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 RNU7-59P-201ENST00000459101 61 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AC098847.1-201ENST00000473094 348 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AC005912.1-201ENST00000495392 255 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AL139099.1-201ENST00000497398 403 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 MTND6P8-201ENST00000503471 522 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AC010343.2-201ENST00000510162 224 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 RNU6-470P-201ENST00000515954 104 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AP000620.1-201ENST00000527147 504 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXA2O43364 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXA2O43364 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXA2O43364 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXA2O43364 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXA2O43364 AL359704.2-201ENST00000604335 521 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXA2O43364 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXA2O43364 AL132640.3-201ENST00000630473 177 ntBASIC6.86□□□□□ -1.31
HOXA2O43364 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXA2O43364 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXA2O43364 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HOXA2O43364 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HOXA2O43364 AC104162.1-201ENST00000430831 2382 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms