Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 MIR649-201ENST00000384843 97 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AL592291.1-201ENST00000403830 352 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM38O00635 RNU4-72P-201ENST00000410754 173 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 P2RY10P2-201ENST00000416730 913 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC016831.2-201ENST00000417179 352 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 RPL7P53-201ENST00000421245 739 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM38O00635 NPM1P34-201ENST00000428821 893 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 OR2B7P-201ENST00000429302 934 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 MTCO2P16-201ENST00000436962 677 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AL450263.2-201ENST00000439400 589 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 MTND3P1-201ENST00000441336 220 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 UBE2D3P4-201ENST00000441973 436 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 TPT1P12-201ENST00000448968 492 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 SLC25A18P1-201ENST00000449385 454 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC108463.1-201ENST00000450258 347 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 snoU13.1-201ENST00000459157 104 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 RPL12P20-201ENST00000475538 479 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 RPL7P18-201ENST00000478965 734 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC005726.1-201ENST00000494679 427 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC111000.3-201ENST00000508057 576 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 AC010587.2-201ENST00000511727 448 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 RNA5SP392-201ENST00000516905 112 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 MTCO1P49-201ENST00000523429 802 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 AP000926.4-201ENST00000527351 454 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 OR4A12P-201ENST00000530847 918 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 TRAV15-201ENST00000556680 249 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM38O00635 TVP23CP2-201ENST00000571473 623 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 MIR5096-201ENST00000583713 70 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM38O00635 AL592221.1-201ENST00000605266 382 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 VIS1.1-201ENST00000610517 203 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AL450489.1-201ENST00000612071 468 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 AC068722.2-201ENST00000618734 544 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 AC022140.2-201ENST00000623500 188 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM38O00635 AL392088.2-201ENST00000637607 285 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 FAM157B-203ENST00000639350 358 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 AC117529.2-201ENST00000512159 2068 ntBASIC4.82□□□□□ -1.64
TRIM38O00635 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM38O00635 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM38O00635 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
TRIM38O00635 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 ZNF542P-204ENST00000482727 1305 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM38O00635 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM38O00635 RNU6-517P-201ENST00000384362 110 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 ZNF603P-201ENST00000405613 487 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM38O00635 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 AC006366.1-201ENST00000422002 759 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 EIF4HP2-201ENST00000424380 563 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 SDCBPP2-201ENST00000424643 885 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 RPL36P19-201ENST00000430744 301 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 NRBF2P3-201ENST00000432731 865 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AC005154.2-201ENST00000438110 379 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 AL512326.1-201ENST00000443050 721 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 MTCO1P48-201ENST00000448024 1096 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 MTND1P16-201ENST00000465177 898 ntBASIC4.81□□□□□ -1.64
TRIM38O00635 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
TRIM38O00635 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM38O00635 AC104090.1-201ENST00000506341 1171 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms