Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC093014.1-201ENST00000548926 724 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC090877.1-201ENST00000561418 344 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC244505.7-201ENST00000599675 272 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL137849.1-201ENST00000604767 169 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC012531.5-201ENST00000611375 151 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL356490.1-201ENST00000623079 479 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC000123.2-201ENST00000623124 461 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC106730.3-201ENST00000624568 641 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP000553.6-201ENST00000641242 118 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNA5SP267-201ENST00000364893 126 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNVU1-14-201ENST00000384770 164 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 U3.19-201ENST00000390893 196 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 MTND4LP7-201ENST00000431728 294 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 MTND4P15-201ENST00000437913 1033 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC092013.1-201ENST00000438795 332 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 PPIAP3-201ENST00000450588 505 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 ANP32BP2-201ENST00000454525 545 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC087385.1-201ENST00000475062 312 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC084198.1-201ENST00000477747 402 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 COL6A4P2-205ENST00000509855 506 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC034244.2-201ENST00000514668 858 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR8K2P-201ENST00000524645 927 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 PDCL2P2-201ENST00000533651 189 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 NCAPGP2-201ENST00000557911 754 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 MIR3922-201ENST00000585192 84 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL133247.2-201ENST00000603236 482 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC083899.3-201ENST00000603413 594 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL355365.1-201ENST00000616480 294 ntBASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.53□□□□□ -1.84
TMX2-CTNND1H3BSU7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.53□□□□□ -1.85
TMX2-CTNND1H3BSU7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
TMX2-CTNND1H3BSU7 DDX6P1-205ENST00000441966 1436 ntBASIC3.53□□□□□ -1.85
TMX2-CTNND1H3BSU7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP002088.1-201ENST00000382740 395 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 RN7SKP177-201ENST00000410567 355 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC245054.1-201ENST00000420944 258 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL159169.1-201ENST00000421119 127 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 MORF4L1P7-201ENST00000426038 703 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC097713.2-201ENST00000430199 356 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 EXTL2P1-201ENST00000446218 416 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 HMGN2P7-201ENST00000456186 273 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP002345.1-201ENST00000456493 928 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL049829.1-201ENST00000465411 156 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 RN7SKP13-201ENST00000515933 244 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC011611.1-201ENST00000552179 197 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC037471.2-201ENST00000564941 598 ntBASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.52□□□□□ -1.85
TMX2-CTNND1H3BSU7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms