Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 SDR42E1P3-201ENST00000438345 502 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 TXNP1-201ENST00000441872 371 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 RNU7-170P-201ENST00000459303 61 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC010468.1-201ENST00000461022 817 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 RPS20P21-201ENST00000466859 343 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC023598.1-201ENST00000472521 361 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC020898.1-201ENST00000474167 787 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC021205.2-201ENST00000480069 347 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC104629.1-201ENST00000494226 508 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 SNORA76.2-201ENST00000517095 137 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AGGF1P6-201ENST00000569213 976 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC053481.4-201ENST00000583164 216 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 MIR4512-201ENST00000583257 77 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC008507.1-201ENST00000587506 734 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 VN1R85P-201ENST00000601587 426 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC144521.1-201ENST00000607148 956 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC069209.1-201ENST00000619282 651 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC110801.1-201ENST00000623590 212 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC090617.9-201ENST00000623751 147 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 NMD3P1-201ENST00000439704 1488 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC090229.1-201ENST00000590983 1609 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RNU1-75P-201ENST00000347264 129 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RNU6-252P-201ENST00000363232 107 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RPS7P13-201ENST00000413955 498 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AL158825.1-201ENST00000414735 521 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC048351.1-201ENST00000420064 602 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AL159169.1-201ENST00000421119 127 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AL121882.1-201ENST00000422893 417 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 FTH1P6-201ENST00000430768 320 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC078857.1-201ENST00000469870 667 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC007537.2-201ENST00000472093 511 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RN7SL442P-201ENST00000473804 320 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 GAPDHP36-201ENST00000480688 918 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 OR9N1P-202ENST00000494289 481 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC005912.1-201ENST00000495392 255 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC026402.1-201ENST00000513642 170 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 FABP5P12-201ENST00000515543 389 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RANP9-201ENST00000519957 271 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC113192.3-201ENST00000529152 742 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 BNIP3P5-201ENST00000562290 498 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 RN7SL703P-201ENST00000578485 302 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC084824.5-201ENST00000612009 413 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC024941.1-201ENST00000612250 334 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC092159.4-201ENST00000624944 550 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC119674.1-207ENST00000641355 633 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 AC007823.1-201ENST00000569932 1566 ntBASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49D1C9J1S8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms