Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC234771.4-201ENST00000441416 730 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AL731563.1-201ENST00000442202 214 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC016696.1-201ENST00000446949 318 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AL031584.1-201ENST00000447169 754 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SL83P-201ENST00000468131 297 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 UBA52P7-201ENST00000486088 380 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 RPL30P11-201ENST00000495304 339 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC079140.5-201ENST00000507882 310 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 HMGN1P9-201ENST00000515212 298 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 RPS27AP18-201ENST00000515536 459 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SKP67-201ENST00000515905 235 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 RANP9-201ENST00000519957 271 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC092470.1-201ENST00000546187 132 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR4680-201ENST00000580906 66 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR3672-201ENST00000584290 82 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC092747.3-201ENST00000603769 301 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC005014.2-201ENST00000607795 599 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC012409.4-201ENST00000612923 249 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AL353662.3-201ENST00000625131 237 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 Z95327.2-201ENST00000414579 1873 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC011369.2-201ENST00000624423 1567 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC010329.2-201ENST00000595195 2737 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 SNORD16-201ENST00000362803 99 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RNA5SP478-201ENST00000364657 115 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 SNORD115-7-201ENST00000365306 82 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-601P-201ENST00000384540 107 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 SNORA7A-201ENST00000384765 139 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 MT-TG-201ENST00000387429 68 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC092642.1-201ENST00000392417 425 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 U3.43-201ENST00000410734 213 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU4-46P-201ENST00000410818 138 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC006509.1-201ENST00000420788 634 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RPL31P11-202ENST00000454082 372 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 MTCO3P10-201ENST00000455912 772 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SL790P-201ENST00000474043 298 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SL809P-201ENST00000482040 297 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 MTND4LP22-201ENST00000508209 276 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-798P-201ENST00000516912 103 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC138761.3-201ENST00000579993 334 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AL008729.2-201ENST00000606393 473 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AL442067.1-201ENST00000613261 223 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 AC008013.2-202ENST00000637965 364 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 BDP1P-201ENST00000582658 1990 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 GTF2IP4-201ENST00000453092 2054 ntBASIC6.18□□□□□ -1.42
PCDHGA11Q9Y5H2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms