Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 RNA5SP235-201ENST00000365411 114 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 OR6K3-202ENST00000368146 996 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 MIR449B-201ENST00000384995 97 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 MIR218-2-201ENST00000385006 110 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 SNORD17-201ENST00000390930 237 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC006989.1-201ENST00000427212 131 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 MTCYBP31-201ENST00000438855 1122 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC092641.1-201ENST00000440229 772 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 RPS29P31-201ENST00000446147 164 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 VN1R34P-201ENST00000447387 883 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 MTCO3P20-201ENST00000454926 688 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 RNU7-27P-201ENST00000459281 62 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC008155.2-201ENST00000464337 397 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 SETP14-201ENST00000497538 873 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 U3.45-201ENST00000607547 219 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 MIR92B-201ENST00000607575 96 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB4Q9UGU5 AL645937.1-201ENST00000641739 1652 ntBASIC3.71□□□□□ -1.81
HMGXB4Q9UGU5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
HMGXB4Q9UGU5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HMGXB4Q9UGU5 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 RNA5SP119-201ENST00000362715 117 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 HSPE1P26-201ENST00000405341 275 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 MTCYBP29-201ENST00000436327 1006 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 RPS7P5-201ENST00000441482 581 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AL606490.8-201ENST00000441624 319 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 MTCO3P16-201ENST00000454456 754 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC007967.1-201ENST00000455422 1159 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 FCF1P3-201ENST00000496394 590 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC110768.1-201ENST00000509222 400 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC005921.1-201ENST00000510589 286 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 DUXAP6-201ENST00000553858 601 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 MIR4738-201ENST00000579134 87 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AP005212.4-201ENST00000614206 710 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 MIR8058-201ENST00000615737 89 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 AC244258.1-201ENST00000637553 1071 ntBASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMGXB4Q9UGU5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 ZNF33CP-201ENST00000432492 2030 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 RNA5SP197-201ENST00000363357 119 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 CCNB2P1-201ENST00000399411 1150 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 AL035458.1-201ENST00000433096 585 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 MRPS18BP2-201ENST00000434310 759 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 RPL6P5-201ENST00000445678 828 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 HMGN2P21-201ENST00000447764 270 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 PDSS1P2-201ENST00000449397 678 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 CCRL1P1-201ENST00000449542 1053 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 MTCYBP14-201ENST00000457471 715 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 RN7SL293P-201ENST00000481765 281 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 AC021146.1-201ENST00000511202 716 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 SNORD116-30-201ENST00000516468 85 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 OR4A2P-201ENST00000527276 913 ntBASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.7□□□□□ -1.82
HMGXB4Q9UGU5 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms