Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FTH1P25-201ENST00000447665 469 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC112204.1-201ENST00000502591 103 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 RPS4XP20-201ENST00000505751 772 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC111000.3-201ENST00000508057 576 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 GAPDHP62-201ENST00000515313 990 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AP000790.1-201ENST00000528891 737 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC122688.1-201ENST00000541494 223 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AL157394.1-201ENST00000562983 1224 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC107954.1-201ENST00000565906 727 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC022884.3-201ENST00000579571 248 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 MIR544B-201ENST00000582372 78 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC010928.3-201ENST00000587712 541 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AL162413.1-201ENST00000603198 110 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC245014.2-201ENST00000603689 287 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC246785.4-201ENST00000605374 287 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 ATE1-AS1-202ENST00000636460 506 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC068870.3-201ENST00000625077 2536 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 CCT4P2-201ENST00000233836 1548 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC138915.3-201ENST00000562908 1389 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 RNU4-79P-201ENST00000362764 141 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 U8.3-201ENST00000363321 132 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 RNU6-767P-201ENST00000384132 107 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 SNORA48.7-201ENST00000391302 135 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 OR4K12P-201ENST00000406538 961 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 RNU6-272P-201ENST00000411028 104 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AL354751.2-201ENST00000415471 210 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 HMGB3P20-201ENST00000417997 600 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 RPL31P35-201ENST00000431058 377 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC138761.5-201ENST00000433967 325 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 SDCBPP1-201ENST00000440192 890 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 MTCO1P42-201ENST00000457379 726 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 SNORD125-201ENST00000459538 96 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC106872.3-201ENST00000495104 446 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 NIPA2P2-201ENST00000496376 1083 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC100784.1-201ENST00000522790 310 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 HSPA8P13-201ENST00000523715 472 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AP003122.4-201ENST00000530980 758 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC092490.3-201ENST00000545370 572 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 BNIP3P1-201ENST00000547295 580 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC090515.3-201ENST00000560431 315 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC090751.1-201ENST00000566966 267 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 NRBF2P1-201ENST00000587407 859 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 TPMTP1-201ENST00000592307 737 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AL133338.2-201ENST00000604292 736 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 COX6CP4-201ENST00000605798 228 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC090948.2-201ENST00000607363 564 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC243773.3-201ENST00000613270 256 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNGAP1Q96PV0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 BCORP1-203ENST00000513194 5093 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 AC144833.1-201ENST00000567953 4089 ntBASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SYNGAP1Q96PV0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms