Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AC006994.1-201ENST00000438212 839 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AC011825.1-201ENST00000484967 388 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AC010374.2-201ENST00000512933 535 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AL162274.2-201ENST00000614406 332 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AC139713.2-210ENST00000641741 992 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AC018529.3-201ENST00000624212 2254 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AC090971.4-201ENST00000560291 1800 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 U3.11-201ENST00000364476 212 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AL138885.1-201ENST00000405921 675 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 RNA5SP293-201ENST00000410527 113 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 RNA5SP107-201ENST00000411358 122 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 HMGB3P6-201ENST00000444896 598 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AL589765.3-201ENST00000446084 462 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AL136097.1-201ENST00000456945 913 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AL049873.1-201ENST00000480540 376 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.78□□□□□ -1.64
VPS8Q8N3P4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS8Q8N3P4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AL645568.2-201ENST00000432815 1337 ntBASIC4.77□□□□□ -1.65
VPS8Q8N3P4 MIR22-201ENST00000362190 85 ntBASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AC097462.2-201ENST00000504623 481 ntBASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AC113192.3-201ENST00000529152 742 ntBASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AC092851.1-201ENST00000535964 478 ntBASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS8Q8N3P4 AC096644.4-201ENST00000563417 2912 ntBASIC4.77□□□□□ -1.65
VPS8Q8N3P4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AL451142.2-201ENST00000429076 2090 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 UBA52P6-201ENST00000399822 382 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 OR2A20P-203ENST00000498397 1268 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AC112184.1-201ENST00000505179 312 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 SNORA64.4-201ENST00000516632 81 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AP000919.1-202ENST00000581139 1264 ntBASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS8Q8N3P4 AC092435.3-201ENST00000565538 3654 ntBASIC4.75□□□□□ -1.65
VPS8Q8N3P4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.75□□□□□ -1.65
VPS8Q8N3P4 RPL37P3-201ENST00000456825 293 ntBASIC4.75□□□□□ -1.65
VPS8Q8N3P4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 CR383656.14-201ENST00000551951 406 ntBASIC4.75□□□□□ -1.65
VPS8Q8N3P4 AL356490.1-201ENST00000623079 479 ntBASIC4.75□□□□□ -1.65
VPS8Q8N3P4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS8Q8N3P4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AC110754.1-201ENST00000399740 601 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AL024507.1-201ENST00000412741 274 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AC245291.1-201ENST00000419501 328 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AC107083.1-201ENST00000439643 279 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 RN7SL442P-201ENST00000473804 320 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 Vault.1-201ENST00000516474 102 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS8Q8N3P4 GABRG2-229ENST00000641017 3628 ntBASIC4.74□□□□□ -1.65
VPS8Q8N3P4 U3.6-201ENST00000363622 211 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 SNORA71.1-201ENST00000364523 117 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 RPL7P44-201ENST00000424827 742 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 RPS4XP22-201ENST00000480755 780 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 RPL7P23-201ENST00000493874 747 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AP002404.1-201ENST00000532005 451 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms