Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 PHBP16-201ENST00000446318 950 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RN7SL98P-201ENST00000462271 300 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 MTND1P16-201ENST00000465177 898 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 FTH1P2-201ENST00000466086 412 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RN7SL303P-201ENST00000469773 251 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC103987.1-201ENST00000473394 348 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 KLRA1P-201ENST00000503499 986 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC118465.1-201ENST00000513820 1271 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RNU6-1129P-201ENST00000515964 104 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 SNORA48.10-201ENST00000516965 160 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC027309.2-201ENST00000520566 192 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC107918.3-201ENST00000533272 382 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC002400.1-201ENST00000569310 726 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC138915.2-201ENST00000569776 97 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC074051.3-201ENST00000570238 358 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL592221.1-201ENST00000605266 382 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 ARF4P1-201ENST00000605447 541 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL008729.2-201ENST00000606393 473 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC131235.4-201ENST00000609288 620 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL360219.1-201ENST00000610230 366 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL359535.1-201ENST00000612100 1087 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 MIR6716-201ENST00000613413 80 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC114781.5-201ENST00000615297 108 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC067852.7-201ENST00000623270 535 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC116618.1-201ENST00000634617 774 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 MTND5P31-201ENST00000419366 1374 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC090971.4-201ENST00000560291 1800 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 LINC00622-201ENST00000562811 1570 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC017104.4-201ENST00000636283 1592 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 OR56B2P-201ENST00000317102 954 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 Y_RNA.408-201ENST00000383987 102 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 OR6C69P-201ENST00000394268 893 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 VDAC1P9-201ENST00000412766 841 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC011933.1-201ENST00000413334 321 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 MFSD13B-201ENST00000420133 1290 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 EIF4EP1-201ENST00000422311 642 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 RPS20P1-201ENST00000434853 354 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 SETP8-201ENST00000435341 628 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 RPS3AP54-201ENST00000435535 734 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 YWHAZP7-201ENST00000436906 631 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 YWHAZP8-201ENST00000436935 731 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC105402.2-201ENST00000438503 358 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC012671.1-201ENST00000451912 203 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC116533.1-201ENST00000459748 321 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 RPS27AP17-201ENST00000463344 455 ntBASIC4.12□□□□□ -1.75
BEST3Q8N1M1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.12□□□□□ -1.75
BEST3Q8N1M1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms