Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC007991.1-201ENST00000522680 631 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AP000916.1-201ENST00000533869 835 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 MIR3158-1-201ENST00000583596 81 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC112230.1-201ENST00000604342 547 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 Z82195.1-201ENST00000604558 398 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC021851.1-201ENST00000608537 1082 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC245100.7-201ENST00000609678 442 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 CR392039.5-201ENST00000623201 510 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC034229.5-201ENST00000624258 185 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC083865.1-201ENST00000636634 831 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
RFWD3Q6PCD5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC095050.2-201ENST00000510748 1458 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 SNORD56.4-201ENST00000363883 71 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 SNORA62.3-201ENST00000365110 153 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RNU6-354P-201ENST00000383862 107 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RNU6-481P-201ENST00000384194 107 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RNU6-610P-201ENST00000384264 107 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 SNORD3H-201ENST00000384486 214 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 MIR142-201ENST00000384835 87 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RPL30P2-201ENST00000414021 291 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 GOT2P5-201ENST00000433995 546 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC006994.1-201ENST00000438212 839 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC092685.1-201ENST00000447960 1243 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RNU7-27P-201ENST00000459281 62 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RNA5SP208-201ENST00000516156 78 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 TRMT10BP1-201ENST00000519377 943 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 BNIP3P39-201ENST00000601077 554 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC245389.1-201ENST00000605141 529 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RMST_10.1-201ENST00000616309 154 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC006133.1-201ENST00000617106 264 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AL713922.2-201ENST00000619384 716 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC079684.1-201ENST00000621405 437 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC244205.2-202ENST00000635781 342 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AL590396.2-201ENST00000636511 1041 ntBASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFWD3Q6PCD5 AC024560.2-201ENST00000507981 1497 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 MIR620-201ENST00000385232 95 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 SOD2P1-201ENST00000396543 562 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 ATF1P1-201ENST00000406040 927 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 RAB9AP3-201ENST00000412737 573 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AL445183.3-201ENST00000414168 502 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AC023128.2-201ENST00000420880 1223 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AL354692.1-201ENST00000423044 315 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AC018644.1-201ENST00000429934 551 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 SNORA71B-202ENST00000439232 272 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 EXTL2P1-201ENST00000446218 416 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 RAB9AP1-201ENST00000449393 573 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 UBDP1-202ENST00000457888 382 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 RPL7P48-201ENST00000461513 746 ntBASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFWD3Q6PCD5 MTATP6P9-201ENST00000515039 680 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms